Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02473 and MPMX26_02474 are separated by 111 nucleotides MPMX26_02474 and MPMX26_02475 are separated by 301 nucleotides MPMX26_02475 and MPMX26_02476 are separated by 99 nucleotides MPMX26_02476 and MPMX26_02477 are separated by 230 nucleotides
MPMX26_02473: MPMX26_02473 - hypothetical protein, at 2,559,272 to 2,559,886
_02473
MPMX26_02474: MPMX26_02474 - hypothetical protein, at 2,559,998 to 2,560,162
_02474
MPMX26_02475: MPMX26_02475 - hypothetical protein, at 2,560,464 to 2,560,844
_02475
MPMX26_02476: MPMX26_02476 - Regulator of ribonuclease activity B, at 2,560,944 to 2,561,330
_02476
MPMX26_02477: MPMX26_02477 - Dual-specificity RNA pseudouridine synthase RluA, at 2,561,561 to 2,562,226
_02477
Position (kb)
2560
2561 Strain fitness (log2 ratio)
-1
0
1 at 2559.503 kb on - strand, within MPMX26_02473 at 2559.547 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.620 kb on - strand, within MPMX26_02473 at 2559.715 kb on - strand, within MPMX26_02473 at 2559.715 kb on - strand, within MPMX26_02473 at 2559.715 kb on - strand, within MPMX26_02473 at 2559.728 kb on - strand, within MPMX26_02473 at 2559.743 kb on - strand, within MPMX26_02473 at 2559.743 kb on - strand, within MPMX26_02473 at 2559.758 kb on - strand, within MPMX26_02473 at 2559.766 kb on - strand, within MPMX26_02473 at 2559.832 kb on - strand at 2560.108 kb on - strand, within MPMX26_02474 at 2560.129 kb on - strand, within MPMX26_02474 at 2560.787 kb on - strand, within MPMX26_02475 at 2561.115 kb on - strand, within MPMX26_02476 at 2561.255 kb on - strand, within MPMX26_02476 at 2561.707 kb on - strand, within MPMX26_02477 at 2561.714 kb on - strand, within MPMX26_02477 at 2561.719 kb on - strand, within MPMX26_02477 at 2561.732 kb on - strand, within MPMX26_02477 at 2561.735 kb on - strand, within MPMX26_02477 at 2561.735 kb on - strand, within MPMX26_02477 at 2561.779 kb on - strand, within MPMX26_02477 at 2561.785 kb on - strand, within MPMX26_02477
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 2,559,503 - MPMX26_02473 0.38 -0.4 2,559,547 - MPMX26_02473 0.45 +0.1 2,559,620 - MPMX26_02473 0.57 +0.1 2,559,620 - MPMX26_02473 0.57 +0.3 2,559,620 - MPMX26_02473 0.57 -0.4 2,559,620 - MPMX26_02473 0.57 +0.7 2,559,620 - MPMX26_02473 0.57 -0.3 2,559,620 - MPMX26_02473 0.57 +1.0 2,559,620 - MPMX26_02473 0.57 +0.0 2,559,715 - MPMX26_02473 0.72 +0.8 2,559,715 - MPMX26_02473 0.72 -0.8 2,559,715 - MPMX26_02473 0.72 +0.2 2,559,728 - MPMX26_02473 0.74 +0.6 2,559,743 - MPMX26_02473 0.77 +0.3 2,559,743 - MPMX26_02473 0.77 +0.3 2,559,758 - MPMX26_02473 0.79 +0.4 2,559,766 - MPMX26_02473 0.80 -0.3 2,559,832 - +0.1 2,560,108 - MPMX26_02474 0.67 -0.2 2,560,129 - MPMX26_02474 0.79 -0.9 2,560,787 - MPMX26_02475 0.85 -0.7 2,561,115 - MPMX26_02476 0.44 -0.2 2,561,255 - MPMX26_02476 0.80 -0.7 2,561,707 - MPMX26_02477 0.22 -0.1 2,561,714 - MPMX26_02477 0.23 -0.8 2,561,719 - MPMX26_02477 0.24 +0.0 2,561,732 - MPMX26_02477 0.26 -0.4 2,561,735 - MPMX26_02477 0.26 -0.1 2,561,735 - MPMX26_02477 0.26 +0.1 2,561,779 - MPMX26_02477 0.33 -0.5 2,561,785 - MPMX26_02477 0.34 +0.6
Or see this region's nucleotide sequence