Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02266 and MPMX26_02267 are separated by 214 nucleotides MPMX26_02267 and MPMX26_02268 are separated by 25 nucleotides MPMX26_02268 and MPMX26_02269 are separated by 303 nucleotides
MPMX26_02266: MPMX26_02266 - Amino-acid permease RocC, at 2,333,769 to 2,335,187
_02266
MPMX26_02267: MPMX26_02267 - tRNA-Glu, at 2,335,402 to 2,335,477
_02267
MPMX26_02268: MPMX26_02268 - tRNA-Glu, at 2,335,503 to 2,335,578
_02268
MPMX26_02269: MPMX26_02269 - NADPH dehydrogenase, at 2,335,882 to 2,337,126
_02269
Position (kb)
2335
2336 Strain fitness (log2 ratio)
-2
-1
0
1 at 2334.579 kb on + strand, within MPMX26_02266 at 2334.615 kb on + strand, within MPMX26_02266 at 2334.615 kb on + strand, within MPMX26_02266 at 2334.662 kb on + strand, within MPMX26_02266 at 2334.662 kb on + strand, within MPMX26_02266 at 2334.662 kb on + strand, within MPMX26_02266 at 2334.662 kb on + strand, within MPMX26_02266 at 2334.662 kb on + strand, within MPMX26_02266 at 2334.662 kb on + strand, within MPMX26_02266 at 2334.662 kb on + strand, within MPMX26_02266 at 2334.676 kb on + strand, within MPMX26_02266 at 2334.702 kb on + strand, within MPMX26_02266 at 2334.702 kb on + strand, within MPMX26_02266 at 2334.707 kb on + strand, within MPMX26_02266 at 2334.710 kb on - strand, within MPMX26_02266 at 2334.744 kb on + strand, within MPMX26_02266 at 2334.744 kb on + strand, within MPMX26_02266 at 2334.744 kb on + strand, within MPMX26_02266 at 2334.814 kb on + strand, within MPMX26_02266 at 2334.905 kb on + strand, within MPMX26_02266 at 2334.918 kb on + strand, within MPMX26_02266 at 2334.918 kb on + strand, within MPMX26_02266 at 2334.918 kb on + strand, within MPMX26_02266 at 2334.930 kb on + strand, within MPMX26_02266 at 2334.930 kb on + strand, within MPMX26_02266 at 2334.930 kb on + strand, within MPMX26_02266 at 2334.936 kb on + strand, within MPMX26_02266 at 2334.952 kb on + strand, within MPMX26_02266 at 2334.960 kb on + strand, within MPMX26_02266 at 2334.962 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.982 kb on + strand, within MPMX26_02266 at 2334.992 kb on + strand, within MPMX26_02266 at 2335.008 kb on + strand, within MPMX26_02266 at 2335.036 kb on + strand, within MPMX26_02266 at 2335.109 kb on + strand at 2335.116 kb on + strand at 2335.145 kb on + strand at 2335.148 kb on + strand at 2335.156 kb on - strand at 2335.176 kb on + strand at 2335.181 kb on + strand at 2335.181 kb on + strand at 2335.181 kb on + strand at 2335.362 kb on + strand at 2335.362 kb on + strand at 2335.376 kb on + strand at 2335.380 kb on + strand at 2335.380 kb on + strand at 2335.380 kb on + strand at 2335.495 kb on + strand at 2335.553 kb on + strand, within MPMX26_02268 at 2335.555 kb on + strand, within MPMX26_02268 at 2335.564 kb on + strand, within MPMX26_02268 at 2335.564 kb on + strand, within MPMX26_02268 at 2335.869 kb on - strand at 2336.190 kb on - strand, within MPMX26_02269 at 2336.233 kb on - strand, within MPMX26_02269
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 2,334,579 + MPMX26_02266 0.57 -0.4 2,334,615 + MPMX26_02266 0.60 -0.3 2,334,615 + MPMX26_02266 0.60 -0.8 2,334,662 + MPMX26_02266 0.63 -0.4 2,334,662 + MPMX26_02266 0.63 -0.1 2,334,662 + MPMX26_02266 0.63 -0.8 2,334,662 + MPMX26_02266 0.63 +0.4 2,334,662 + MPMX26_02266 0.63 -0.6 2,334,662 + MPMX26_02266 0.63 -0.8 2,334,662 + MPMX26_02266 0.63 -0.8 2,334,676 + MPMX26_02266 0.64 -1.0 2,334,702 + MPMX26_02266 0.66 -0.8 2,334,702 + MPMX26_02266 0.66 -0.8 2,334,707 + MPMX26_02266 0.66 -0.1 2,334,710 - MPMX26_02266 0.66 -0.7 2,334,744 + MPMX26_02266 0.69 -1.1 2,334,744 + MPMX26_02266 0.69 +0.3 2,334,744 + MPMX26_02266 0.69 -1.1 2,334,814 + MPMX26_02266 0.74 -1.5 2,334,905 + MPMX26_02266 0.80 -0.8 2,334,918 + MPMX26_02266 0.81 -0.8 2,334,918 + MPMX26_02266 0.81 -0.9 2,334,918 + MPMX26_02266 0.81 -0.2 2,334,930 + MPMX26_02266 0.82 -0.5 2,334,930 + MPMX26_02266 0.82 -1.0 2,334,930 + MPMX26_02266 0.82 -0.4 2,334,936 + MPMX26_02266 0.82 +0.0 2,334,952 + MPMX26_02266 0.83 -0.8 2,334,960 + MPMX26_02266 0.84 -0.2 2,334,962 + MPMX26_02266 0.84 -2.1 2,334,982 + MPMX26_02266 0.85 -1.3 2,334,982 + MPMX26_02266 0.85 -0.2 2,334,982 + MPMX26_02266 0.85 -0.7 2,334,982 + MPMX26_02266 0.85 +0.3 2,334,982 + MPMX26_02266 0.85 -0.4 2,334,982 + MPMX26_02266 0.85 -0.6 2,334,982 + MPMX26_02266 0.85 -1.0 2,334,982 + MPMX26_02266 0.85 +0.2 2,334,982 + MPMX26_02266 0.85 +0.6 2,334,982 + MPMX26_02266 0.85 -0.3 2,334,982 + MPMX26_02266 0.85 -1.2 2,334,982 + MPMX26_02266 0.85 -1.7 2,334,982 + MPMX26_02266 0.85 -0.9 2,334,992 + MPMX26_02266 0.86 +0.3 2,335,008 + MPMX26_02266 0.87 -0.3 2,335,036 + MPMX26_02266 0.89 -0.2 2,335,109 + -0.4 2,335,116 + +0.8 2,335,145 + -0.7 2,335,148 + -1.0 2,335,156 - -1.0 2,335,176 + -0.9 2,335,181 + -1.1 2,335,181 + -0.2 2,335,181 + -0.4 2,335,362 + -1.6 2,335,362 + -0.7 2,335,376 + +0.6 2,335,380 + +0.1 2,335,380 + -0.7 2,335,380 + +0.2 2,335,495 + +0.1 2,335,553 + MPMX26_02268 0.66 +0.3 2,335,555 + MPMX26_02268 0.68 +0.6 2,335,564 + MPMX26_02268 0.80 +0.2 2,335,564 + MPMX26_02268 0.80 +0.7 2,335,869 - +0.2 2,336,190 - MPMX26_02269 0.25 +1.5 2,336,233 - MPMX26_02269 0.28 +0.4
Or see this region's nucleotide sequence