Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01048 and MPMX26_01049 are separated by 4 nucleotides MPMX26_01049 and MPMX26_01050 are separated by 848 nucleotides
MPMX26_01048: MPMX26_01048 - tRNA-specific 2-thiouridylase MnmA, at 1,111,787 to 1,112,920
_01048
MPMX26_01049: MPMX26_01049 - Phosphatase NudJ, at 1,112,925 to 1,113,410
_01049
MPMX26_01050: MPMX26_01050 - Protein YrdA, at 1,114,259 to 1,114,795
_01050
Position (kb)
1112
1113
1114 Strain fitness (log2 ratio)
-1
0
1 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.014 kb on - strand, within MPMX26_01049 at 1113.024 kb on - strand, within MPMX26_01049 at 1113.032 kb on - strand, within MPMX26_01049 at 1113.034 kb on - strand, within MPMX26_01049 at 1113.034 kb on - strand, within MPMX26_01049 at 1113.034 kb on - strand, within MPMX26_01049 at 1113.034 kb on - strand, within MPMX26_01049 at 1113.034 kb on - strand, within MPMX26_01049 at 1113.034 kb on - strand, within MPMX26_01049 at 1113.057 kb on - strand, within MPMX26_01049 at 1113.057 kb on - strand, within MPMX26_01049 at 1113.057 kb on - strand, within MPMX26_01049 at 1113.057 kb on - strand, within MPMX26_01049 at 1113.070 kb on - strand, within MPMX26_01049 at 1113.070 kb on - strand, within MPMX26_01049 at 1113.070 kb on - strand, within MPMX26_01049 at 1113.071 kb on - strand, within MPMX26_01049 at 1113.080 kb on - strand, within MPMX26_01049 at 1113.080 kb on - strand, within MPMX26_01049 at 1113.107 kb on - strand, within MPMX26_01049 at 1113.107 kb on - strand, within MPMX26_01049 at 1113.107 kb on - strand, within MPMX26_01049 at 1113.107 kb on - strand, within MPMX26_01049 at 1113.107 kb on - strand, within MPMX26_01049 at 1113.132 kb on - strand, within MPMX26_01049 at 1113.132 kb on - strand, within MPMX26_01049 at 1113.132 kb on - strand, within MPMX26_01049 at 1113.138 kb on - strand, within MPMX26_01049 at 1113.333 kb on - strand, within MPMX26_01049 at 1113.395 kb on - strand at 1114.339 kb on - strand, within MPMX26_01050 at 1114.388 kb on - strand, within MPMX26_01050
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 1,113,014 - MPMX26_01049 0.18 -0.4 1,113,014 - MPMX26_01049 0.18 -1.3 1,113,014 - MPMX26_01049 0.18 -0.2 1,113,014 - MPMX26_01049 0.18 -0.2 1,113,014 - MPMX26_01049 0.18 +0.0 1,113,014 - MPMX26_01049 0.18 -0.3 1,113,014 - MPMX26_01049 0.18 -0.4 1,113,014 - MPMX26_01049 0.18 -1.0 1,113,014 - MPMX26_01049 0.18 -0.8 1,113,024 - MPMX26_01049 0.20 +0.4 1,113,032 - MPMX26_01049 0.22 -1.7 1,113,034 - MPMX26_01049 0.22 -1.2 1,113,034 - MPMX26_01049 0.22 -0.9 1,113,034 - MPMX26_01049 0.22 -1.2 1,113,034 - MPMX26_01049 0.22 -0.7 1,113,034 - MPMX26_01049 0.22 -0.7 1,113,034 - MPMX26_01049 0.22 -1.3 1,113,057 - MPMX26_01049 0.27 -0.9 1,113,057 - MPMX26_01049 0.27 -0.8 1,113,057 - MPMX26_01049 0.27 -1.2 1,113,057 - MPMX26_01049 0.27 -0.1 1,113,070 - MPMX26_01049 0.30 +0.8 1,113,070 - MPMX26_01049 0.30 -0.4 1,113,070 - MPMX26_01049 0.30 -0.9 1,113,071 - MPMX26_01049 0.30 -0.5 1,113,080 - MPMX26_01049 0.32 -0.9 1,113,080 - MPMX26_01049 0.32 -0.4 1,113,107 - MPMX26_01049 0.37 -0.1 1,113,107 - MPMX26_01049 0.37 -1.4 1,113,107 - MPMX26_01049 0.37 -1.0 1,113,107 - MPMX26_01049 0.37 -1.4 1,113,107 - MPMX26_01049 0.37 -0.7 1,113,132 - MPMX26_01049 0.43 -1.4 1,113,132 - MPMX26_01049 0.43 +0.1 1,113,132 - MPMX26_01049 0.43 -0.5 1,113,138 - MPMX26_01049 0.44 -1.6 1,113,333 - MPMX26_01049 0.84 -1.0 1,113,395 - +0.1 1,114,339 - MPMX26_01050 0.15 +0.2 1,114,388 - MPMX26_01050 0.24 +0.0
Or see this region's nucleotide sequence