Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01049

Experiment: TSB

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01048 and MPMX26_01049 are separated by 4 nucleotidesMPMX26_01049 and MPMX26_01050 are separated by 848 nucleotides MPMX26_01048: MPMX26_01048 - tRNA-specific 2-thiouridylase MnmA, at 1,111,787 to 1,112,920 _01048 MPMX26_01049: MPMX26_01049 - Phosphatase NudJ, at 1,112,925 to 1,113,410 _01049 MPMX26_01050: MPMX26_01050 - Protein YrdA, at 1,114,259 to 1,114,795 _01050 Position (kb) 1112 1113 1114Strain fitness (log2 ratio) -1 0 1at 1113.014 kb on - strand, within MPMX26_01049at 1113.014 kb on - strand, within MPMX26_01049at 1113.014 kb on - strand, within MPMX26_01049at 1113.014 kb on - strand, within MPMX26_01049at 1113.014 kb on - strand, within MPMX26_01049at 1113.014 kb on - strand, within MPMX26_01049at 1113.014 kb on - strand, within MPMX26_01049at 1113.014 kb on - strand, within MPMX26_01049at 1113.014 kb on - strand, within MPMX26_01049at 1113.024 kb on - strand, within MPMX26_01049at 1113.032 kb on - strand, within MPMX26_01049at 1113.034 kb on - strand, within MPMX26_01049at 1113.034 kb on - strand, within MPMX26_01049at 1113.034 kb on - strand, within MPMX26_01049at 1113.034 kb on - strand, within MPMX26_01049at 1113.034 kb on - strand, within MPMX26_01049at 1113.034 kb on - strand, within MPMX26_01049at 1113.057 kb on - strand, within MPMX26_01049at 1113.057 kb on - strand, within MPMX26_01049at 1113.057 kb on - strand, within MPMX26_01049at 1113.057 kb on - strand, within MPMX26_01049at 1113.070 kb on - strand, within MPMX26_01049at 1113.070 kb on - strand, within MPMX26_01049at 1113.070 kb on - strand, within MPMX26_01049at 1113.071 kb on - strand, within MPMX26_01049at 1113.080 kb on - strand, within MPMX26_01049at 1113.080 kb on - strand, within MPMX26_01049at 1113.107 kb on - strand, within MPMX26_01049at 1113.107 kb on - strand, within MPMX26_01049at 1113.107 kb on - strand, within MPMX26_01049at 1113.107 kb on - strand, within MPMX26_01049at 1113.107 kb on - strand, within MPMX26_01049at 1113.132 kb on - strand, within MPMX26_01049at 1113.132 kb on - strand, within MPMX26_01049at 1113.132 kb on - strand, within MPMX26_01049at 1113.138 kb on - strand, within MPMX26_01049at 1113.333 kb on - strand, within MPMX26_01049at 1113.395 kb on - strandat 1114.339 kb on - strand, within MPMX26_01050at 1114.388 kb on - strand, within MPMX26_01050

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Per-strain Table

Position Strand Gene LocusTag Fraction TSB
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1,113,014 - MPMX26_01049 0.18 -0.4
1,113,014 - MPMX26_01049 0.18 -1.3
1,113,014 - MPMX26_01049 0.18 -0.2
1,113,014 - MPMX26_01049 0.18 -0.2
1,113,014 - MPMX26_01049 0.18 +0.0
1,113,014 - MPMX26_01049 0.18 -0.3
1,113,014 - MPMX26_01049 0.18 -0.4
1,113,014 - MPMX26_01049 0.18 -1.0
1,113,014 - MPMX26_01049 0.18 -0.8
1,113,024 - MPMX26_01049 0.20 +0.4
1,113,032 - MPMX26_01049 0.22 -1.7
1,113,034 - MPMX26_01049 0.22 -1.2
1,113,034 - MPMX26_01049 0.22 -0.9
1,113,034 - MPMX26_01049 0.22 -1.2
1,113,034 - MPMX26_01049 0.22 -0.7
1,113,034 - MPMX26_01049 0.22 -0.7
1,113,034 - MPMX26_01049 0.22 -1.3
1,113,057 - MPMX26_01049 0.27 -0.9
1,113,057 - MPMX26_01049 0.27 -0.8
1,113,057 - MPMX26_01049 0.27 -1.2
1,113,057 - MPMX26_01049 0.27 -0.1
1,113,070 - MPMX26_01049 0.30 +0.8
1,113,070 - MPMX26_01049 0.30 -0.4
1,113,070 - MPMX26_01049 0.30 -0.9
1,113,071 - MPMX26_01049 0.30 -0.5
1,113,080 - MPMX26_01049 0.32 -0.9
1,113,080 - MPMX26_01049 0.32 -0.4
1,113,107 - MPMX26_01049 0.37 -0.1
1,113,107 - MPMX26_01049 0.37 -1.4
1,113,107 - MPMX26_01049 0.37 -1.0
1,113,107 - MPMX26_01049 0.37 -1.4
1,113,107 - MPMX26_01049 0.37 -0.7
1,113,132 - MPMX26_01049 0.43 -1.4
1,113,132 - MPMX26_01049 0.43 +0.1
1,113,132 - MPMX26_01049 0.43 -0.5
1,113,138 - MPMX26_01049 0.44 -1.6
1,113,333 - MPMX26_01049 0.84 -1.0
1,113,395 - +0.1
1,114,339 - MPMX26_01050 0.15 +0.2
1,114,388 - MPMX26_01050 0.24 +0.0

Or see this region's nucleotide sequence