Experiment: TSB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00237 and MPMX26_00238 overlap by 8 nucleotides MPMX26_00238 and MPMX26_00239 are separated by 335 nucleotides MPMX26_00239 and MPMX26_00240 are separated by 607 nucleotides
MPMX26_00237: MPMX26_00237 - Putative pre-16S rRNA nuclease, at 257,841 to 258,284
_00237
MPMX26_00238: MPMX26_00238 - hypothetical protein, at 258,277 to 258,831
_00238
MPMX26_00239: MPMX26_00239 - DNA repair protein RecN, at 259,167 to 260,828
_00239
MPMX26_00240: MPMX26_00240 - Pyrimidine/purine nucleoside phosphorylase, at 261,436 to 261,759
_00240
Position (kb) 259
260
261 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 258.288 kb on - strand at 258.349 kb on - strand, within MPMX26_00238 at 258.361 kb on - strand, within MPMX26_00238 at 258.409 kb on - strand, within MPMX26_00238 at 258.457 kb on - strand, within MPMX26_00238 at 258.457 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.462 kb on - strand, within MPMX26_00238 at 258.467 kb on - strand, within MPMX26_00238 at 258.472 kb on - strand, within MPMX26_00238 at 258.490 kb on - strand, within MPMX26_00238 at 258.490 kb on - strand, within MPMX26_00238 at 258.490 kb on - strand, within MPMX26_00238 at 258.490 kb on - strand, within MPMX26_00238 at 258.536 kb on - strand, within MPMX26_00238 at 258.612 kb on - strand, within MPMX26_00238 at 258.635 kb on - strand, within MPMX26_00238 at 258.635 kb on - strand, within MPMX26_00238 at 258.685 kb on - strand, within MPMX26_00238 at 258.716 kb on - strand, within MPMX26_00238 at 258.735 kb on - strand, within MPMX26_00238 at 258.745 kb on - strand, within MPMX26_00238 at 258.745 kb on - strand, within MPMX26_00238 at 258.754 kb on - strand, within MPMX26_00238 at 258.754 kb on - strand, within MPMX26_00238 at 258.837 kb on - strand at 258.837 kb on - strand at 258.837 kb on - strand at 258.837 kb on - strand at 258.963 kb on - strand at 258.963 kb on - strand at 259.027 kb on - strand at 259.040 kb on - strand at 259.054 kb on - strand at 259.054 kb on - strand at 259.054 kb on - strand at 259.054 kb on - strand at 259.074 kb on - strand at 259.149 kb on - strand at 259.188 kb on - strand at 259.188 kb on - strand at 259.207 kb on - strand at 259.207 kb on - strand at 259.207 kb on - strand at 259.209 kb on - strand at 259.216 kb on - strand at 259.217 kb on - strand at 259.249 kb on - strand at 259.274 kb on - strand at 259.300 kb on - strand at 259.319 kb on - strand at 259.348 kb on - strand, within MPMX26_00239 at 259.380 kb on - strand, within MPMX26_00239 at 259.405 kb on - strand, within MPMX26_00239 at 259.405 kb on - strand, within MPMX26_00239 at 259.405 kb on - strand, within MPMX26_00239 at 259.405 kb on - strand, within MPMX26_00239 at 259.433 kb on - strand, within MPMX26_00239 at 259.433 kb on - strand, within MPMX26_00239 at 259.446 kb on + strand, within MPMX26_00239 at 259.454 kb on - strand, within MPMX26_00239 at 259.454 kb on - strand, within MPMX26_00239 at 259.478 kb on - strand, within MPMX26_00239 at 259.518 kb on - strand, within MPMX26_00239 at 259.528 kb on - strand, within MPMX26_00239 at 259.533 kb on - strand, within MPMX26_00239 at 259.533 kb on - strand, within MPMX26_00239 at 259.572 kb on - strand, within MPMX26_00239 at 259.572 kb on - strand, within MPMX26_00239 at 259.612 kb on - strand, within MPMX26_00239 at 259.618 kb on - strand, within MPMX26_00239 at 259.619 kb on - strand, within MPMX26_00239 at 259.619 kb on - strand, within MPMX26_00239 at 259.619 kb on - strand, within MPMX26_00239 at 259.630 kb on - strand, within MPMX26_00239 at 259.632 kb on - strand, within MPMX26_00239 at 259.632 kb on - strand, within MPMX26_00239 at 259.632 kb on - strand, within MPMX26_00239 at 259.632 kb on - strand, within MPMX26_00239 at 259.632 kb on - strand, within MPMX26_00239 at 259.642 kb on - strand, within MPMX26_00239 at 259.692 kb on - strand, within MPMX26_00239 at 259.692 kb on - strand, within MPMX26_00239 at 259.692 kb on - strand, within MPMX26_00239 at 259.692 kb on - strand, within MPMX26_00239 at 259.723 kb on - strand, within MPMX26_00239 at 259.723 kb on - strand, within MPMX26_00239 at 259.759 kb on - strand, within MPMX26_00239 at 259.778 kb on - strand, within MPMX26_00239 at 259.778 kb on - strand, within MPMX26_00239 at 259.791 kb on - strand, within MPMX26_00239 at 259.791 kb on - strand, within MPMX26_00239 at 259.791 kb on - strand, within MPMX26_00239 at 259.861 kb on - strand, within MPMX26_00239 at 259.872 kb on - strand, within MPMX26_00239 at 259.893 kb on - strand, within MPMX26_00239 at 259.893 kb on - strand, within MPMX26_00239 at 259.935 kb on - strand, within MPMX26_00239 at 259.935 kb on - strand, within MPMX26_00239 at 259.945 kb on - strand, within MPMX26_00239 at 259.959 kb on - strand, within MPMX26_00239 at 259.960 kb on - strand, within MPMX26_00239 at 259.967 kb on - strand, within MPMX26_00239 at 259.986 kb on - strand, within MPMX26_00239 at 260.013 kb on - strand, within MPMX26_00239 at 260.051 kb on - strand, within MPMX26_00239 at 260.056 kb on - strand, within MPMX26_00239 at 260.056 kb on - strand, within MPMX26_00239 at 260.100 kb on - strand, within MPMX26_00239 at 260.135 kb on - strand, within MPMX26_00239 at 260.157 kb on - strand, within MPMX26_00239 at 260.157 kb on - strand, within MPMX26_00239 at 260.162 kb on - strand, within MPMX26_00239 at 260.162 kb on - strand, within MPMX26_00239 at 260.162 kb on - strand, within MPMX26_00239 at 260.268 kb on - strand, within MPMX26_00239 at 260.286 kb on - strand, within MPMX26_00239 at 260.286 kb on - strand, within MPMX26_00239 at 260.291 kb on - strand, within MPMX26_00239 at 260.397 kb on - strand, within MPMX26_00239 at 260.431 kb on - strand, within MPMX26_00239 at 260.448 kb on - strand, within MPMX26_00239 at 260.448 kb on - strand, within MPMX26_00239 at 260.448 kb on - strand, within MPMX26_00239 at 260.448 kb on - strand, within MPMX26_00239 at 260.448 kb on - strand, within MPMX26_00239 at 260.448 kb on - strand, within MPMX26_00239 at 260.498 kb on - strand, within MPMX26_00239 at 260.509 kb on - strand, within MPMX26_00239 at 260.520 kb on - strand, within MPMX26_00239 at 260.552 kb on - strand, within MPMX26_00239 at 260.552 kb on - strand, within MPMX26_00239 at 260.552 kb on - strand, within MPMX26_00239 at 260.552 kb on - strand, within MPMX26_00239 at 260.597 kb on - strand, within MPMX26_00239 at 260.597 kb on - strand, within MPMX26_00239 at 260.597 kb on - strand, within MPMX26_00239 at 260.597 kb on - strand, within MPMX26_00239 at 260.607 kb on - strand, within MPMX26_00239 at 260.607 kb on - strand, within MPMX26_00239 at 260.607 kb on - strand, within MPMX26_00239 at 260.607 kb on - strand, within MPMX26_00239 at 260.608 kb on - strand, within MPMX26_00239 at 260.618 kb on - strand, within MPMX26_00239 at 260.640 kb on - strand, within MPMX26_00239 at 260.640 kb on - strand, within MPMX26_00239 at 260.640 kb on - strand, within MPMX26_00239 at 260.645 kb on - strand, within MPMX26_00239 at 260.656 kb on - strand, within MPMX26_00239 at 260.681 kb on - strand at 260.729 kb on - strand at 260.729 kb on - strand at 260.744 kb on - strand at 260.744 kb on - strand at 260.751 kb on - strand at 260.761 kb on - strand at 260.768 kb on - strand at 260.808 kb on - strand at 260.808 kb on - strand at 260.818 kb on - strand at 260.818 kb on - strand at 260.818 kb on - strand at 260.833 kb on - strand at 260.842 kb on - strand at 260.842 kb on - strand at 260.865 kb on - strand at 260.865 kb on - strand at 260.865 kb on - strand at 260.865 kb on - strand at 260.865 kb on - strand at 260.880 kb on - strand at 260.890 kb on - strand at 260.981 kb on - strand at 261.000 kb on + strand at 261.056 kb on - strand at 261.178 kb on - strand at 261.217 kb on + strand at 261.256 kb on + strand at 261.261 kb on + strand at 261.283 kb on + strand at 261.283 kb on + strand at 261.295 kb on + strand at 261.295 kb on + strand at 261.295 kb on + strand at 261.309 kb on + strand at 261.437 kb on + strand at 261.437 kb on + strand at 261.437 kb on + strand at 261.437 kb on + strand at 261.437 kb on + strand at 261.437 kb on + strand at 261.437 kb on + strand at 261.437 kb on + strand at 261.437 kb on + strand at 261.445 kb on - strand at 261.447 kb on + strand at 261.619 kb on + strand, within MPMX26_00240 at 261.653 kb on + strand, within MPMX26_00240 at 261.658 kb on + strand, within MPMX26_00240 at 261.658 kb on + strand, within MPMX26_00240 at 261.658 kb on + strand, within MPMX26_00240 at 261.658 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.663 kb on + strand, within MPMX26_00240 at 261.688 kb on + strand, within MPMX26_00240 at 261.781 kb on + strand at 261.781 kb on + strand at 261.786 kb on + strand at 261.791 kb on + strand at 261.791 kb on + strand at 261.791 kb on + strand at 261.791 kb on + strand at 261.792 kb on + strand at 261.796 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction TSB remove 258,288 - -0.0 258,349 - MPMX26_00238 0.13 -0.2 258,361 - MPMX26_00238 0.15 -0.8 258,409 - MPMX26_00238 0.24 -0.0 258,457 - MPMX26_00238 0.32 +0.0 258,457 - MPMX26_00238 0.32 +0.4 258,462 - MPMX26_00238 0.33 -1.1 258,462 - MPMX26_00238 0.33 +0.5 258,462 - MPMX26_00238 0.33 +0.0 258,462 - MPMX26_00238 0.33 +0.5 258,462 - MPMX26_00238 0.33 -0.2 258,462 - MPMX26_00238 0.33 -0.2 258,462 - MPMX26_00238 0.33 -0.2 258,462 - MPMX26_00238 0.33 -0.1 258,462 - MPMX26_00238 0.33 -0.2 258,462 - MPMX26_00238 0.33 -0.7 258,462 - MPMX26_00238 0.33 -1.0 258,467 - MPMX26_00238 0.34 -0.6 258,472 - MPMX26_00238 0.35 +0.4 258,490 - MPMX26_00238 0.38 -0.3 258,490 - MPMX26_00238 0.38 -0.1 258,490 - MPMX26_00238 0.38 -0.0 258,490 - MPMX26_00238 0.38 -1.2 258,536 - MPMX26_00238 0.47 -0.2 258,612 - MPMX26_00238 0.60 -1.1 258,635 - MPMX26_00238 0.65 +0.1 258,635 - MPMX26_00238 0.65 +0.4 258,685 - MPMX26_00238 0.74 -0.3 258,716 - MPMX26_00238 0.79 -0.2 258,735 - MPMX26_00238 0.83 -0.8 258,745 - MPMX26_00238 0.84 -0.7 258,745 - MPMX26_00238 0.84 +0.0 258,754 - MPMX26_00238 0.86 -0.5 258,754 - MPMX26_00238 0.86 -0.8 258,837 - +0.0 258,837 - -0.4 258,837 - -0.2 258,837 - -0.7 258,963 - -0.6 258,963 - -0.2 259,027 - +3.1 259,040 - +0.1 259,054 - -0.5 259,054 - -1.5 259,054 - +0.4 259,054 - -0.9 259,074 - +0.2 259,149 - +0.2 259,188 - +0.6 259,188 - -0.6 259,207 - +0.0 259,207 - +1.1 259,207 - -0.0 259,209 - -0.4 259,216 - -0.9 259,217 - -1.5 259,249 - -2.5 259,274 - -0.3 259,300 - -0.1 259,319 - +0.2 259,348 - MPMX26_00239 0.11 -0.9 259,380 - MPMX26_00239 0.13 -0.5 259,405 - MPMX26_00239 0.14 +0.3 259,405 - MPMX26_00239 0.14 -0.6 259,405 - MPMX26_00239 0.14 +0.8 259,405 - MPMX26_00239 0.14 -1.1 259,433 - MPMX26_00239 0.16 -0.2 259,433 - MPMX26_00239 0.16 +0.0 259,446 + MPMX26_00239 0.17 -0.5 259,454 - MPMX26_00239 0.17 -0.1 259,454 - MPMX26_00239 0.17 -0.8 259,478 - MPMX26_00239 0.19 -2.0 259,518 - MPMX26_00239 0.21 -1.0 259,528 - MPMX26_00239 0.22 +0.2 259,533 - MPMX26_00239 0.22 +0.5 259,533 - MPMX26_00239 0.22 +0.1 259,572 - MPMX26_00239 0.24 +0.2 259,572 - MPMX26_00239 0.24 -0.3 259,612 - MPMX26_00239 0.27 +0.6 259,618 - MPMX26_00239 0.27 -0.2 259,619 - MPMX26_00239 0.27 +0.0 259,619 - MPMX26_00239 0.27 +0.5 259,619 - MPMX26_00239 0.27 -1.2 259,630 - MPMX26_00239 0.28 -0.1 259,632 - MPMX26_00239 0.28 -0.5 259,632 - MPMX26_00239 0.28 +0.3 259,632 - MPMX26_00239 0.28 -0.5 259,632 - MPMX26_00239 0.28 -0.7 259,632 - MPMX26_00239 0.28 -0.4 259,642 - MPMX26_00239 0.29 -0.6 259,692 - MPMX26_00239 0.32 -0.6 259,692 - MPMX26_00239 0.32 -0.1 259,692 - MPMX26_00239 0.32 +1.1 259,692 - MPMX26_00239 0.32 +0.1 259,723 - MPMX26_00239 0.33 +0.5 259,723 - MPMX26_00239 0.33 -0.2 259,759 - MPMX26_00239 0.36 -0.1 259,778 - MPMX26_00239 0.37 -0.4 259,778 - MPMX26_00239 0.37 -0.1 259,791 - MPMX26_00239 0.38 -0.9 259,791 - MPMX26_00239 0.38 +1.4 259,791 - MPMX26_00239 0.38 -0.0 259,861 - MPMX26_00239 0.42 +0.4 259,872 - MPMX26_00239 0.42 -0.1 259,893 - MPMX26_00239 0.44 -0.8 259,893 - MPMX26_00239 0.44 +0.3 259,935 - MPMX26_00239 0.46 +0.3 259,935 - MPMX26_00239 0.46 -0.3 259,945 - MPMX26_00239 0.47 -0.3 259,959 - MPMX26_00239 0.48 -0.1 259,960 - MPMX26_00239 0.48 -0.5 259,967 - MPMX26_00239 0.48 -0.8 259,986 - MPMX26_00239 0.49 +0.3 260,013 - MPMX26_00239 0.51 -0.2 260,051 - MPMX26_00239 0.53 -0.3 260,056 - MPMX26_00239 0.53 +0.2 260,056 - MPMX26_00239 0.53 +0.1 260,100 - MPMX26_00239 0.56 +0.2 260,135 - MPMX26_00239 0.58 -0.1 260,157 - MPMX26_00239 0.60 -0.2 260,157 - MPMX26_00239 0.60 +0.5 260,162 - MPMX26_00239 0.60 +0.3 260,162 - MPMX26_00239 0.60 +0.4 260,162 - MPMX26_00239 0.60 +0.2 260,268 - MPMX26_00239 0.66 -0.1 260,286 - MPMX26_00239 0.67 -1.3 260,286 - MPMX26_00239 0.67 -2.1 260,291 - MPMX26_00239 0.68 -0.4 260,397 - MPMX26_00239 0.74 +0.3 260,431 - MPMX26_00239 0.76 +1.2 260,448 - MPMX26_00239 0.77 -0.3 260,448 - MPMX26_00239 0.77 -0.2 260,448 - MPMX26_00239 0.77 -0.0 260,448 - MPMX26_00239 0.77 -0.4 260,448 - MPMX26_00239 0.77 -0.4 260,448 - MPMX26_00239 0.77 -0.4 260,498 - MPMX26_00239 0.80 -0.6 260,509 - MPMX26_00239 0.81 -0.2 260,520 - MPMX26_00239 0.81 -1.5 260,552 - MPMX26_00239 0.83 -0.3 260,552 - MPMX26_00239 0.83 +0.0 260,552 - MPMX26_00239 0.83 +0.1 260,552 - MPMX26_00239 0.83 -0.5 260,597 - MPMX26_00239 0.86 -0.0 260,597 - MPMX26_00239 0.86 -0.3 260,597 - MPMX26_00239 0.86 +0.0 260,597 - MPMX26_00239 0.86 -0.0 260,607 - MPMX26_00239 0.87 +0.1 260,607 - MPMX26_00239 0.87 -0.1 260,607 - MPMX26_00239 0.87 +0.3 260,607 - MPMX26_00239 0.87 -0.2 260,608 - MPMX26_00239 0.87 +0.4 260,618 - MPMX26_00239 0.87 -0.1 260,640 - MPMX26_00239 0.89 -1.0 260,640 - MPMX26_00239 0.89 +0.3 260,640 - MPMX26_00239 0.89 -0.3 260,645 - MPMX26_00239 0.89 +0.1 260,656 - MPMX26_00239 0.90 +0.2 260,681 - -0.5 260,729 - +0.2 260,729 - +0.0 260,744 - +0.1 260,744 - -0.5 260,751 - -0.4 260,761 - -0.7 260,768 - -0.1 260,808 - -0.8 260,808 - +1.0 260,818 - -2.0 260,818 - -0.3 260,818 - -0.6 260,833 - -0.5 260,842 - +0.1 260,842 - -0.5 260,865 - +0.3 260,865 - -0.6 260,865 - -0.5 260,865 - -0.4 260,865 - -0.1 260,880 - -0.8 260,890 - +0.9 260,981 - +2.1 261,000 + +0.0 261,056 - +0.5 261,178 - +0.0 261,217 + -0.7 261,256 + -1.2 261,261 + -1.1 261,283 + +0.2 261,283 + +0.6 261,295 + +0.1 261,295 + -1.3 261,295 + +0.0 261,309 + -0.1 261,437 + +1.5 261,437 + +0.1 261,437 + +0.2 261,437 + -1.0 261,437 + -0.6 261,437 + -0.5 261,437 + -0.3 261,437 + -0.0 261,437 + -0.2 261,445 - -0.1 261,447 + -0.0 261,619 + MPMX26_00240 0.56 +0.2 261,653 + MPMX26_00240 0.67 -0.8 261,658 + MPMX26_00240 0.69 -0.1 261,658 + MPMX26_00240 0.69 -0.5 261,658 + MPMX26_00240 0.69 +0.0 261,658 + MPMX26_00240 0.69 -0.3 261,663 + MPMX26_00240 0.70 -0.0 261,663 + MPMX26_00240 0.70 -0.6 261,663 + MPMX26_00240 0.70 -0.0 261,663 + MPMX26_00240 0.70 -0.6 261,663 + MPMX26_00240 0.70 +0.1 261,663 + MPMX26_00240 0.70 -0.0 261,663 + MPMX26_00240 0.70 +0.2 261,663 + MPMX26_00240 0.70 -0.2 261,663 + MPMX26_00240 0.70 -0.3 261,663 + MPMX26_00240 0.70 -0.2 261,688 + MPMX26_00240 0.78 -0.1 261,781 + +0.4 261,781 + +0.2 261,786 + +0.2 261,791 + +0.1 261,791 + +0.4 261,791 + -0.0 261,791 + -0.2 261,792 + +0.3 261,796 + -0.4
Or see this region's nucleotide sequence