Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5298

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
2,309,144	-		GFF5297	0.33	+0.2
2,309,145	-		GFF5297	0.33	-2.1
2,309,267	+		GFF5297	0.45	+0.7
2,309,790	-				+0.9
2,309,948	-				-0.4
2,310,295	+		GFF5298	0.14	+0.2
2,310,296	-		GFF5298	0.14	-0.5
2,310,334	+		GFF5298	0.17	-0.2
2,310,724	+		GFF5298	0.52	-0.1
2,310,724	+		GFF5298	0.52	-0.8
2,310,725	-		GFF5298	0.52	-0.7
2,310,725	-		GFF5298	0.52	-1.1
2,311,242	-				+1.3
2,311,634	-		GFF5299	0.18	-0.1
2,311,872	+		GFF5299	0.30	+0.6
2,311,976	-		GFF5299	0.35	-0.9