Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4860

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,866,733	-				+0.7
1,866,733	-				-0.5
1,868,003	+		GFF4861	0.17	+0.7
1,868,003	+		GFF4861	0.17	-1.3
1,868,177	+		GFF4861	0.43	-1.5
1,868,177	+		GFF4861	0.43	-0.5
1,868,177	+		GFF4861	0.43	-1.9
1,868,177	+		GFF4861	0.43	-0.8
1,868,178	-		GFF4861	0.43	-1.6
1,868,178	-		GFF4861	0.43	-2.7
1,868,178	-		GFF4861	0.43	-1.8
1,868,178	-		GFF4861	0.43	-1.5
1,868,420	+		GFF4861	0.79	+0.1
1,868,606	+				-0.0
1,868,606	+				+1.2
1,868,607	-				+0.9
1,868,607	-				+0.0
1,868,607	-				-0.2
1,868,607	-				-1.3