Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4818

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,827,351	-				-0.6
1,827,384	+				+1.6
1,827,385	-				-0.3
1,827,813	-				-0.2
1,827,813	-				-0.3
1,828,012	-		GFF4817	0.86	-0.1
1,828,012	-		GFF4817	0.86	+0.4
1,828,012	-		GFF4817	0.86	-0.5
1,828,112	+				-0.7
1,828,113	-				-0.0
1,828,113	-				-0.3
1,828,409	+		GFF4818	0.24	-1.0
1,828,412	+		GFF4818	0.24	-0.8
1,828,412	+		GFF4818	0.24	+0.1
1,828,412	+		GFF4818	0.24	-0.3
1,828,412	+		GFF4818	0.24	+0.1
1,828,412	+		GFF4818	0.24	-0.3
1,828,413	-		GFF4818	0.24	-0.5
1,828,413	-		GFF4818	0.24	+0.7
1,828,413	-		GFF4818	0.24	-1.1
1,828,550	+		GFF4818	0.33	-0.4
1,828,550	+		GFF4818	0.33	-0.5
1,828,781	+		GFF4818	0.48	-0.3
1,829,036	+		GFF4818	0.64	-0.8
1,829,036	+		GFF4818	0.64	+0.2
1,829,037	-		GFF4818	0.64	-0.3
1,829,273	+		GFF4818	0.79	-0.0
1,829,477	+				+0.7
1,829,662	-				+0.2
1,829,705	+				-0.5
1,829,706	-				-0.4
1,829,706	-				-0.0
1,830,024	+		GFF4819	0.31	-0.4
1,830,025	-		GFF4819	0.31	-0.3
1,830,181	-		GFF4819	0.48	+0.4
1,830,181	-		GFF4819	0.48	-0.6