Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4279

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,204,222	+				-0.3
1,204,222	+				-0.9
1,204,223	-				-0.3
1,204,238	+				-0.4
1,204,238	+				+0.2
1,204,238	+				+0.1
1,204,238	+				+1.8
1,204,238	+				+0.8
1,204,238	+				+0.1
1,204,238	+				-0.2
1,204,239	-				-0.9
1,204,239	-				-0.5
1,204,239	-				+0.8
1,204,239	-				-0.5
1,204,239	-				+0.5
1,204,239	-				+1.1
1,204,339	+				-0.8
1,204,339	+				+0.3
1,204,339	+				-0.9
1,204,339	+				-0.8
1,204,340	-				+0.1
1,204,340	-				+1.6
1,204,382	+				+1.1
1,204,382	+				+0.1
1,204,382	+				-0.0
1,204,382	+				-0.8
1,204,382	+				+2.0
1,204,382	+				+0.2
1,204,382	+				-0.4
1,204,382	+				-0.5
1,204,382	+				-1.2
1,204,382	+				+1.0
1,204,382	+				-1.2
1,204,382	+				+0.8
1,204,382	+				-1.1
1,204,382	+				+0.0
1,204,382	+				-0.6
1,204,382	+				-0.8
1,205,139	-				+0.1
1,205,173	+				+1.1
1,205,173	+				+0.2
1,205,173	+				-1.4
1,205,173	+				-0.4
1,205,173	+				-0.1
1,205,174	-				-0.6
1,205,176	+				+1.2
1,205,176	+				+0.3
1,205,176	+				-1.8
1,205,176	+				+0.2
1,205,176	+				-0.6
1,205,176	+				-0.7
1,205,176	+				-0.5
1,205,176	+				+1.2
1,205,176	+				-1.4
1,205,176	+				+0.1
1,205,177	-				+0.6
1,205,177	-				+1.1
1,205,177	-				+0.6
1,205,177	-				-0.1
1,205,285	+				-0.0
1,205,285	+				+0.8
1,205,286	-				+0.1
1,205,286	-				-0.3
1,205,286	-				+0.0
1,205,327	+				+0.2
1,205,327	+				-1.8
1,205,328	-				-1.7
1,205,328	-				-3.1
1,205,608	+		GFF4280	0.18	-0.2
1,205,609	-		GFF4280	0.18	-2.5
1,205,609	-		GFF4280	0.18	-1.2
1,205,609	-		GFF4280	0.18	-0.9
1,205,609	-		GFF4280	0.18	-2.0
1,205,684	+		GFF4280	0.23	+0.2
1,205,684	+		GFF4280	0.23	-1.6
1,205,684	+		GFF4280	0.23	-1.8
1,205,684	+		GFF4280	0.23	+0.2
1,205,684	+		GFF4280	0.23	-1.4
1,205,684	+		GFF4280	0.23	-0.8
1,205,684	+		GFF4280	0.23	-1.1
1,205,684	+		GFF4280	0.23	-1.5
1,205,685	-		GFF4280	0.23	-0.4
1,205,685	-		GFF4280	0.23	-1.4
1,205,685	-		GFF4280	0.23	+0.6
1,205,822	+		GFF4280	0.31	-3.6
1,205,822	+		GFF4280	0.31	-0.9
1,205,822	+		GFF4280	0.31	+0.4
1,205,823	-		GFF4280	0.31	-2.1
1,205,823	-		GFF4280	0.31	-0.5