Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF353

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
15,257	+		GFF352	0.14	-0.4
15,257	+		GFF352	0.14	-0.4
15,258	-		GFF352	0.14	-0.6
15,258	-		GFF352	0.14	+0.0
15,258	-		GFF352	0.14	+0.3
15,266	+		GFF352	0.15	-0.8
15,266	+		GFF352	0.15	+0.3
15,266	+		GFF352	0.15	+1.6
15,267	-		GFF352	0.15	+0.5
15,267	-		GFF352	0.15	-0.5
15,267	-		GFF352	0.15	-0.2
15,328	+		GFF352	0.21	+0.6
15,328	+		GFF352	0.21	-0.1
15,329	-		GFF352	0.21	-0.2
15,377	+		GFF352	0.26	-1.8
15,378	-		GFF352	0.26	-1.0
15,378	-		GFF352	0.26	+0.2
15,378	-		GFF352	0.26	-0.2
15,410	+		GFF352	0.29	+1.2
15,410	+		GFF352	0.29	+0.4
15,411	-		GFF352	0.29	-1.7
15,411	-		GFF352	0.29	-0.2
15,875	-		GFF352	0.75	-0.1
16,236	+				-0.0
16,236	+				-1.4
16,236	+				+0.9
16,236	+				+1.1
16,236	+				+0.1
16,285	-		GFF353	0.12	-0.4
16,635	+				+0.0
16,946	+		GFF354	0.54	-0.7
16,946	+		GFF354	0.54	-0.7
16,946	+		GFF354	0.54	-1.2
16,947	-		GFF354	0.54	-0.6
16,947	-		GFF354	0.54	-1.3
17,013	-		GFF354	0.69	-0.9
17,021	+		GFF354	0.71	+0.5
17,021	+		GFF354	0.71	-0.9
17,054	+		GFF354	0.78	-0.5
17,054	+		GFF354	0.78	+0.5
17,054	+		GFF354	0.78	+0.7
17,054	+		GFF354	0.78	-0.7
17,055	-		GFF354	0.78	+0.3
17,055	-		GFF354	0.78	-1.2
17,085	-		GFF354	0.85	-1.7
17,164	+				-0.1
17,165	-				+0.8
17,424	+				+1.1
17,425	-				-0.1