Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF299

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
311,544	+				+0.5
311,544	+				-0.1
311,545	-				-0.2
311,599	+				-0.7
312,215	+		GFF298	0.81	+1.0
312,215	+		GFF298	0.81	-1.0
312,215	+		GFF298	0.81	-1.9
312,215	+		GFF298	0.81	-0.2
312,216	-		GFF298	0.81	+1.3
312,216	-		GFF298	0.81	+0.0
312,216	-		GFF298	0.81	-0.2
312,450	+		GFF299	0.15	-0.6
312,450	+		GFF299	0.15	-0.1
312,450	+		GFF299	0.15	+0.1
312,450	+		GFF299	0.15	-1.1
312,451	-		GFF299	0.16	+1.7
312,451	-		GFF299	0.16	-0.2
312,451	-		GFF299	0.16	+0.4
312,451	-		GFF299	0.16	+1.7
312,451	-		GFF299	0.16	+0.3
312,849	+				-0.6
312,850	-				+0.3
312,850	-				-0.7
312,850	-				+0.7
312,850	-				+0.0
312,851	+				+0.7
312,851	+				+0.9
312,851	+				+0.2
312,851	+				-1.2
312,851	+				-0.5
312,852	-				+1.0
312,852	-				-0.8
312,852	-				+0.8
312,852	-				-0.2