Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2610

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
202,568	+				+0.2
202,568	+				-0.8
202,569	-				-0.5
202,700	+		GFF2610	0.11	+3.9
202,701	-		GFF2610	0.11	+3.6
202,701	-		GFF2610	0.11	+3.7
202,701	-		GFF2610	0.11	+3.9
202,701	-		GFF2610	0.11	+3.6
203,161	+		GFF2610	0.47	+3.7
203,312	+		GFF2610	0.59	+3.5
203,313	-		GFF2610	0.59	+3.9
203,513	+		GFF2610	0.75	+3.5
203,598	-		GFF2610	0.81	+3.8
203,656	+		GFF2610	0.86	+3.5
203,777	+				+3.1
203,778	-				+2.2
203,865	+				-0.9
203,866	-				-0.7
203,866	-				-1.3
204,084	+		GFF2611	0.12	-0.9
204,084	+		GFF2611	0.12	-0.3
204,085	-		GFF2611	0.12	+1.5
204,459	+		GFF2611	0.33	+1.3
204,459	+		GFF2611	0.33	+0.1
204,459	+		GFF2611	0.33	-0.0
204,582	+		GFF2611	0.40	+0.1