Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2441

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
20,881	+		GFF2439	0.86	-0.3
21,239	+		GFF2440	0.44	-0.5
21,240	-		GFF2440	0.44	-0.2
21,251	+		GFF2440	0.46	-0.3
21,251	+		GFF2440	0.46	+1.5
21,251	+		GFF2440	0.46	-0.4
21,251	+		GFF2440	0.46	-0.6
21,251	+		GFF2440	0.46	-1.4
21,251	+		GFF2440	0.46	-0.9
21,252	-		GFF2440	0.47	-0.7
21,252	-		GFF2440	0.47	-0.6
21,252	-		GFF2440	0.47	-0.0
21,252	-		GFF2440	0.47	+0.8
21,252	-		GFF2440	0.47	-0.6
21,252	-		GFF2440	0.47	+0.0
21,323	+		GFF2440	0.60	-0.5
21,324	-		GFF2440	0.60	-0.7
21,401	+		GFF2440	0.74	+0.2
21,401	+		GFF2440	0.74	-0.3
21,401	+		GFF2440	0.74	+0.2
21,402	-		GFF2440	0.74	-0.1
21,402	-		GFF2440	0.74	-0.3
21,572	-				-0.5
21,572	-				-0.2
21,572	-				+0.1
21,572	-				-1.0
21,577	-				+0.3
21,637	+				-1.0
21,637	+				-0.1
21,637	+				-0.2
21,637	+				+0.1
21,637	+				+1.5
21,637	+				+0.3
21,638	-				+0.9
21,638	-				+2.1
21,638	-				-0.1
21,638	-				-0.1
21,638	-				+0.8
21,638	-				+0.1
22,007	+		GFF2441	0.14	+1.8
22,008	-		GFF2441	0.14	-0.1
22,025	+		GFF2441	0.15	+0.1
22,025	+		GFF2441	0.15	+1.1
22,025	+		GFF2441	0.15	-0.4
22,025	+		GFF2441	0.15	-0.3
22,025	+		GFF2441	0.15	-0.5
22,026	-		GFF2441	0.15	+0.1
22,026	-		GFF2441	0.15	-1.3
22,207	+		GFF2441	0.24	+1.7
22,208	-		GFF2441	0.24	-0.8
22,268	+		GFF2441	0.27	+0.8
22,268	+		GFF2441	0.27	+0.8
22,268	+		GFF2441	0.27	+0.6
22,268	+		GFF2441	0.27	-0.1
22,269	-		GFF2441	0.27	-0.3
22,406	+		GFF2441	0.34	+0.2
22,406	+		GFF2441	0.34	+0.7
22,406	+		GFF2441	0.34	-0.4
22,406	+		GFF2441	0.34	-2.4
22,406	+		GFF2441	0.34	+1.2
22,407	-		GFF2441	0.34	-0.3
22,578	-		GFF2441	0.42	+0.4
22,607	+		GFF2441	0.44	-0.3
22,715	+		GFF2441	0.49	-0.1
22,715	+		GFF2441	0.49	-0.2
22,716	-		GFF2441	0.49	+1.1
23,558	+				-0.3
23,627	+				-0.4
23,627	+				+0.8
23,693	+				+0.8
23,693	+				+0.3
23,693	+				+0.1
23,693	+				+1.1
23,694	-				-0.4
23,694	-				-0.1
23,732	+				+0.0
23,732	+				-0.5
23,733	-				-0.4
23,733	-				-1.3
23,733	-				-1.5
23,733	-				+3.3
23,733	-				-0.1
23,733	-				-0.2
23,771	+				-0.1