Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2178

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
1,070,425	-				+2.4
1,070,806	-		GFF2177	0.42	-0.6
1,070,806	-		GFF2177	0.42	-0.3
1,070,806	-		GFF2177	0.42	+0.7
1,070,892	+		GFF2177	0.51	-1.5
1,070,893	-		GFF2177	0.51	+2.1
1,070,949	+		GFF2177	0.57	+0.7
1,070,949	+		GFF2177	0.57	-0.0
1,070,949	+		GFF2177	0.57	+0.1
1,070,950	-		GFF2177	0.57	-0.3
1,071,096	+		GFF2177	0.71	+1.5
1,071,280	-		GFF2177	0.90	-0.5
1,071,923	+		GFF2178	0.52	-0.4
1,071,923	+		GFF2178	0.52	-0.8
1,071,923	+		GFF2178	0.52	-1.0
1,071,923	+		GFF2178	0.52	-1.4
1,071,923	+		GFF2178	0.52	+0.7
1,071,923	+		GFF2178	0.52	-1.0
1,071,924	-		GFF2178	0.52	-1.4
1,072,386	-				-0.5
1,072,463	+				-0.5
1,072,833	-		GFF2179	0.39	+0.6
1,072,922	+		GFF2179	0.49	+1.2
1,072,922	+		GFF2179	0.49	-2.4
1,073,384	+				-0.2
1,073,384	+				+1.0
1,073,384	+				+2.1