Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1592

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
446,531	+		GFF1591	0.30	+0.8
446,730	-		GFF1591	0.49	-0.2
446,730	-		GFF1591	0.49	+0.7
446,772	+		GFF1591	0.53	-0.1
446,942	+		GFF1591	0.69	-0.2
446,943	-		GFF1591	0.70	+1.0
446,943	-		GFF1591	0.70	+0.4
447,029	+		GFF1591	0.78	+0.3
447,029	+		GFF1591	0.78	+1.2
447,030	-		GFF1591	0.78	-0.9
447,308	-				-0.5
447,354	+				-0.6
448,006	+		GFF1592	0.77	-0.2
448,121	+				-0.4
448,121	+				+0.3
448,265	-				-0.5
448,265	-				+0.5
448,371	-				-1.3
448,491	-				+0.2
448,556	+				-0.9
448,556	+				-0.2
448,556	+				+0.0
448,556	+				+0.2
448,556	+				-1.5
448,556	+				-0.5
448,556	+				-0.4
448,557	-				-1.0
448,557	-				-0.5
448,557	-				-0.2
448,557	-				+1.5
448,557	-				-2.2
448,557	-				+0.3
448,557	-				-0.1
448,557	-				+0.1
448,557	-				+0.7
448,557	-				-0.2
448,557	-				-0.9
448,557	-				+0.3
448,568	+				-0.3
448,568	+				-0.2
448,737	+		GFF1593	0.24	+0.8
448,738	-		GFF1593	0.25	+0.4
449,079	+		GFF1593	0.81	-0.7
449,151	+				-1.1
449,151	+				-1.2
449,187	+				+0.2
449,187	+				+0.1