Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1501

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
349,904	+		GFF1500	0.44	-0.5
349,905	-		GFF1500	0.44	-0.6
349,905	-		GFF1500	0.44	-0.6
349,944	-		GFF1500	0.48	-0.6
350,105	+		GFF1500	0.65	+0.0
350,105	+		GFF1500	0.65	+0.0
350,106	-		GFF1500	0.66	+0.3
350,106	-		GFF1500	0.66	+0.5
350,106	-		GFF1500	0.66	+0.7
350,106	-		GFF1500	0.66	-1.2
350,106	-		GFF1500	0.66	-0.5
350,106	-		GFF1500	0.66	-0.1
350,163	-		GFF1500	0.72	-0.1
350,192	+		GFF1500	0.75	+0.2
350,585	+				+0.2
350,586	-				+1.3
350,586	-				-0.5
350,774	+				-1.6
350,774	+				+0.9
351,590	+		GFF1501	0.69	+1.7
351,726	-		GFF1501	0.82	+0.7
351,979	+				+0.9
351,979	+				-1.6
351,979	+				-0.4
351,980	-				-0.3
352,345	+		GFF1502	0.22	+0.1
352,345	+		GFF1502	0.22	+0.7
352,346	-		GFF1502	0.22	-0.8
352,522	+		GFF1502	0.33	-0.5