Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1250

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
108,403	+		GFF1250	0.13	+1.9
108,404	-		GFF1250	0.14	+1.5
108,404	-		GFF1250	0.14	+1.6
108,470	-		GFF1250	0.23	+1.0
108,503	-		GFF1250	0.28	+1.1
108,503	-		GFF1250	0.28	+1.1
108,698	-		GFF1250	0.57	+1.3
108,698	-		GFF1250	0.57	+1.4
109,424	+				-0.9
109,424	+				+0.3
109,424	+				-1.3
109,424	+				-0.4
109,425	-				-0.2
109,425	-				-2.5
109,425	-				+0.0
109,438	-				-0.5
109,478	+				+0.1
109,478	+				-0.9
109,478	+				-0.3
109,479	-				-0.3