Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1152

Experiment: Ying_all64 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 2
7,625	+		GFF1151	0.12	+0.5
7,932	-		GFF1151	0.44	+2.0
8,031	-		GFF1151	0.54	-0.4
8,424	-				+1.0
8,575	+		GFF1152	0.17	-0.3
8,576	-		GFF1152	0.17	-1.3
8,884	+		GFF1152	0.60	+0.7
8,885	-		GFF1152	0.60	-1.3
8,899	+		GFF1152	0.62	-0.3
8,899	+		GFF1152	0.62	-0.4
8,899	+		GFF1152	0.62	+1.8
9,067	+		GFF1152	0.85	-1.1
9,067	+		GFF1152	0.85	+0.2
9,067	+		GFF1152	0.85	+0.5
9,067	+		GFF1152	0.85	+0.9
9,067	+		GFF1152	0.85	+0.2
9,068	-		GFF1152	0.85	+1.2
9,068	-		GFF1152	0.85	-0.6
9,091	+		GFF1152	0.88	+0.5
9,127	+				+1.7
9,128	-				-0.6
9,154	+				+0.9
9,155	-				-0.1
9,155	-				+2.5
9,592	+		GFF1153	0.44	-0.2
10,044	-				+1.3