Strain Fitness in Escherichia coli ECRC102 around NIAGMN_28075

Experiment: Bas14

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntybcY and NIAGMN_28075 are separated by 497 nucleotidesNIAGMN_28075 and yciE are separated by 78 nucleotidesyciE and yciE are separated by 36 nucleotides NIAGMN_28070: ybcY - Putative uncharacterized protein YbcY, at 5,437,280 to 5,437,948 ybcY NIAGMN_28075: NIAGMN_28075 - stress-induced acidophilic repeat motif-containing protein, at 5,438,446 to 5,438,628 _28075 NIAGMN_28080: yciE - Protein YciF, at 5,438,707 to 5,439,207 yciE NIAGMN_28085: yciE - Protein YciE, at 5,439,244 to 5,439,750 yciE Position (kb) 5438 5439Strain fitness (log2 ratio) -1 0 1at 5437.921 kb on - strandat 5438.777 kb on + strand, within yciE

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas14
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5,437,921 - -1.6
5,438,777 + yciE NIAGMN_28080 0.14 +1.2

Or see this region's nucleotide sequence