Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02166 and MPMX26_02167 are separated by 27 nucleotides MPMX26_02167 and MPMX26_02168 are separated by 86 nucleotides MPMX26_02168 and MPMX26_02169 overlap by 4 nucleotides MPMX26_02169 and MPMX26_02170 are separated by 11 nucleotides
MPMX26_02166: MPMX26_02166 - Sulfate-binding protein, at 2,221,781 to 2,222,794
_02166
MPMX26_02167: MPMX26_02167 - hypothetical protein, at 2,222,822 to 2,223,433
_02167
MPMX26_02168: MPMX26_02168 - Sulfate transport system permease protein CysT, at 2,223,520 to 2,224,353
_02168
MPMX26_02169: MPMX26_02169 - Sulfate transport system permease protein CysW, at 2,224,350 to 2,225,243
_02169
MPMX26_02170: MPMX26_02170 - Sulfate/thiosulfate import ATP-binding protein CysA, at 2,225,255 to 2,226,316
_02170
Position (kb)
2223
2224
2225 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2223.514 kb on + strand at 2223.514 kb on + strand at 2223.533 kb on + strand at 2223.585 kb on + strand at 2223.585 kb on + strand at 2223.585 kb on + strand at 2223.595 kb on + strand at 2223.616 kb on + strand, within MPMX26_02168 at 2223.831 kb on + strand, within MPMX26_02168 at 2223.886 kb on + strand, within MPMX26_02168 at 2223.938 kb on + strand, within MPMX26_02168 at 2223.997 kb on + strand, within MPMX26_02168 at 2223.997 kb on + strand, within MPMX26_02168 at 2223.997 kb on + strand, within MPMX26_02168 at 2224.039 kb on + strand, within MPMX26_02168 at 2224.102 kb on + strand, within MPMX26_02168 at 2224.141 kb on + strand, within MPMX26_02168 at 2224.144 kb on + strand, within MPMX26_02168 at 2224.144 kb on + strand, within MPMX26_02168 at 2224.146 kb on + strand, within MPMX26_02168 at 2224.228 kb on + strand, within MPMX26_02168 at 2224.309 kb on + strand at 2224.314 kb on + strand at 2224.353 kb on + strand at 2224.409 kb on + strand at 2224.419 kb on + strand at 2224.434 kb on + strand at 2224.436 kb on + strand at 2224.461 kb on + strand, within MPMX26_02169 at 2224.471 kb on + strand, within MPMX26_02169 at 2224.517 kb on + strand, within MPMX26_02169 at 2224.517 kb on + strand, within MPMX26_02169 at 2224.544 kb on + strand, within MPMX26_02169 at 2224.630 kb on + strand, within MPMX26_02169 at 2224.632 kb on + strand, within MPMX26_02169 at 2224.632 kb on + strand, within MPMX26_02169 at 2224.669 kb on + strand, within MPMX26_02169 at 2224.669 kb on + strand, within MPMX26_02169 at 2224.669 kb on + strand, within MPMX26_02169 at 2224.669 kb on + strand, within MPMX26_02169 at 2224.692 kb on + strand, within MPMX26_02169 at 2224.805 kb on + strand, within MPMX26_02169 at 2224.835 kb on + strand, within MPMX26_02169 at 2224.852 kb on + strand, within MPMX26_02169 at 2224.922 kb on + strand, within MPMX26_02169 at 2224.922 kb on + strand, within MPMX26_02169 at 2224.922 kb on + strand, within MPMX26_02169 at 2224.935 kb on + strand, within MPMX26_02169 at 2224.977 kb on + strand, within MPMX26_02169 at 2225.012 kb on + strand, within MPMX26_02169 at 2225.034 kb on + strand, within MPMX26_02169 at 2225.049 kb on + strand, within MPMX26_02169 at 2225.049 kb on + strand, within MPMX26_02169 at 2225.142 kb on + strand, within MPMX26_02169 at 2225.142 kb on + strand, within MPMX26_02169 at 2225.142 kb on + strand, within MPMX26_02169 at 2225.142 kb on + strand, within MPMX26_02169 at 2225.216 kb on + strand at 2225.336 kb on + strand at 2225.353 kb on + strand at 2225.353 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,223,514 + -1.4 2,223,514 + -1.0 2,223,533 + -1.1 2,223,585 + -0.9 2,223,585 + -1.0 2,223,585 + -1.0 2,223,595 + -0.7 2,223,616 + MPMX26_02168 0.12 -0.9 2,223,831 + MPMX26_02168 0.37 -0.7 2,223,886 + MPMX26_02168 0.44 -1.2 2,223,938 + MPMX26_02168 0.50 +0.4 2,223,997 + MPMX26_02168 0.57 -1.0 2,223,997 + MPMX26_02168 0.57 -0.8 2,223,997 + MPMX26_02168 0.57 -1.9 2,224,039 + MPMX26_02168 0.62 -1.1 2,224,102 + MPMX26_02168 0.70 +0.1 2,224,141 + MPMX26_02168 0.74 -0.2 2,224,144 + MPMX26_02168 0.75 +0.2 2,224,144 + MPMX26_02168 0.75 -0.1 2,224,146 + MPMX26_02168 0.75 +0.5 2,224,228 + MPMX26_02168 0.85 -0.3 2,224,309 + +0.4 2,224,314 + +0.3 2,224,353 + -0.5 2,224,409 + -0.0 2,224,419 + -0.3 2,224,434 + -0.1 2,224,436 + -0.1 2,224,461 + MPMX26_02169 0.12 +2.1 2,224,471 + MPMX26_02169 0.14 -1.2 2,224,517 + MPMX26_02169 0.19 +0.2 2,224,517 + MPMX26_02169 0.19 -0.2 2,224,544 + MPMX26_02169 0.22 +0.0 2,224,630 + MPMX26_02169 0.31 +0.4 2,224,632 + MPMX26_02169 0.32 +0.6 2,224,632 + MPMX26_02169 0.32 -0.3 2,224,669 + MPMX26_02169 0.36 -0.5 2,224,669 + MPMX26_02169 0.36 +0.1 2,224,669 + MPMX26_02169 0.36 -0.2 2,224,669 + MPMX26_02169 0.36 +0.3 2,224,692 + MPMX26_02169 0.38 -0.1 2,224,805 + MPMX26_02169 0.51 +0.6 2,224,835 + MPMX26_02169 0.54 +0.2 2,224,852 + MPMX26_02169 0.56 +0.4 2,224,922 + MPMX26_02169 0.64 +0.3 2,224,922 + MPMX26_02169 0.64 +0.5 2,224,922 + MPMX26_02169 0.64 +0.3 2,224,935 + MPMX26_02169 0.65 +0.1 2,224,977 + MPMX26_02169 0.70 -0.2 2,225,012 + MPMX26_02169 0.74 +0.5 2,225,034 + MPMX26_02169 0.77 +0.3 2,225,049 + MPMX26_02169 0.78 -0.2 2,225,049 + MPMX26_02169 0.78 +0.1 2,225,142 + MPMX26_02169 0.89 +1.0 2,225,142 + MPMX26_02169 0.89 -0.2 2,225,142 + MPMX26_02169 0.89 +0.0 2,225,142 + MPMX26_02169 0.89 -0.7 2,225,216 + +0.4 2,225,336 + -1.1 2,225,353 + -0.5 2,225,353 + -1.3
Or see this region's nucleotide sequence