Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02104

Experiment: D,L-Lactate (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02103 and MPMX26_02104 overlap by 4 nucleotidesMPMX26_02104 and MPMX26_02105 overlap by 4 nucleotidesMPMX26_02105 and MPMX26_02106 are separated by 25 nucleotides MPMX26_02103: MPMX26_02103 - putative ABC transporter ATP-binding protein YadG, at 2,157,614 to 2,158,549 _02103 MPMX26_02104: MPMX26_02104 - Inner membrane transport permease YadH, at 2,158,546 to 2,159,319 _02104 MPMX26_02105: MPMX26_02105 - NADPH-dependent 7-cyano-7-deazaguanine reductase, at 2,159,316 to 2,160,128 _02105 MPMX26_02106: MPMX26_02106 - hypothetical protein, at 2,160,154 to 2,160,804 _02106 Position (kb) 2158 2159 2160Strain fitness (log2 ratio) -2 -1 0 1 2at 2157.610 kb on + strandat 2157.610 kb on + strandat 2157.643 kb on + strandat 2157.643 kb on + strandat 2157.697 kb on + strandat 2157.727 kb on + strand, within MPMX26_02103at 2157.737 kb on + strand, within MPMX26_02103at 2157.740 kb on + strand, within MPMX26_02103at 2157.745 kb on + strand, within MPMX26_02103at 2157.754 kb on + strand, within MPMX26_02103at 2157.761 kb on + strand, within MPMX26_02103at 2157.763 kb on + strand, within MPMX26_02103at 2157.763 kb on + strand, within MPMX26_02103at 2157.763 kb on + strand, within MPMX26_02103at 2157.787 kb on + strand, within MPMX26_02103at 2157.797 kb on + strand, within MPMX26_02103at 2157.797 kb on + strand, within MPMX26_02103at 2157.838 kb on + strand, within MPMX26_02103at 2157.850 kb on + strand, within MPMX26_02103at 2157.861 kb on + strand, within MPMX26_02103at 2157.869 kb on + strand, within MPMX26_02103at 2157.925 kb on + strand, within MPMX26_02103at 2157.981 kb on + strand, within MPMX26_02103at 2157.981 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.007 kb on + strand, within MPMX26_02103at 2158.014 kb on + strand, within MPMX26_02103at 2158.060 kb on + strand, within MPMX26_02103at 2158.104 kb on + strand, within MPMX26_02103at 2158.116 kb on + strand, within MPMX26_02103at 2158.116 kb on + strand, within MPMX26_02103at 2158.116 kb on + strand, within MPMX26_02103at 2158.116 kb on + strand, within MPMX26_02103at 2158.116 kb on + strand, within MPMX26_02103at 2158.121 kb on + strand, within MPMX26_02103at 2158.131 kb on + strand, within MPMX26_02103at 2158.173 kb on + strand, within MPMX26_02103at 2158.321 kb on + strand, within MPMX26_02103at 2158.321 kb on + strand, within MPMX26_02103at 2158.330 kb on + strand, within MPMX26_02103at 2158.432 kb on + strand, within MPMX26_02103at 2158.432 kb on + strand, within MPMX26_02103at 2158.432 kb on + strand, within MPMX26_02103at 2158.432 kb on + strand, within MPMX26_02103at 2158.472 kb on + strandat 2158.614 kb on + strandat 2158.614 kb on + strandat 2158.621 kb on + strandat 2158.626 kb on + strand, within MPMX26_02104at 2158.632 kb on + strand, within MPMX26_02104at 2158.632 kb on + strand, within MPMX26_02104at 2158.699 kb on + strand, within MPMX26_02104at 2158.712 kb on + strand, within MPMX26_02104at 2158.727 kb on + strand, within MPMX26_02104at 2158.746 kb on + strand, within MPMX26_02104at 2158.780 kb on + strand, within MPMX26_02104at 2158.841 kb on + strand, within MPMX26_02104at 2158.854 kb on + strand, within MPMX26_02104at 2158.888 kb on + strand, within MPMX26_02104at 2158.898 kb on + strand, within MPMX26_02104at 2158.900 kb on + strand, within MPMX26_02104at 2158.900 kb on + strand, within MPMX26_02104at 2158.900 kb on + strand, within MPMX26_02104at 2158.905 kb on + strand, within MPMX26_02104at 2158.905 kb on + strand, within MPMX26_02104at 2158.905 kb on + strand, within MPMX26_02104at 2158.910 kb on + strand, within MPMX26_02104at 2158.945 kb on + strand, within MPMX26_02104at 2158.945 kb on + strand, within MPMX26_02104at 2158.945 kb on + strand, within MPMX26_02104at 2158.950 kb on + strand, within MPMX26_02104at 2159.001 kb on + strand, within MPMX26_02104at 2159.001 kb on + strand, within MPMX26_02104at 2159.097 kb on + strand, within MPMX26_02104at 2159.097 kb on + strand, within MPMX26_02104at 2159.101 kb on + strand, within MPMX26_02104at 2159.104 kb on + strand, within MPMX26_02104at 2159.152 kb on + strand, within MPMX26_02104at 2159.178 kb on + strand, within MPMX26_02104at 2159.248 kb on + strandat 2159.248 kb on + strandat 2159.248 kb on + strandat 2159.253 kb on + strandat 2159.253 kb on + strandat 2159.263 kb on + strandat 2159.310 kb on + strandat 2159.320 kb on + strandat 2159.405 kb on + strand, within MPMX26_02105at 2159.405 kb on + strand, within MPMX26_02105at 2159.405 kb on + strand, within MPMX26_02105at 2159.405 kb on + strand, within MPMX26_02105at 2159.415 kb on + strand, within MPMX26_02105at 2159.415 kb on + strand, within MPMX26_02105at 2159.415 kb on + strand, within MPMX26_02105at 2159.415 kb on + strand, within MPMX26_02105at 2159.426 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.445 kb on + strand, within MPMX26_02105at 2159.499 kb on + strand, within MPMX26_02105at 2159.519 kb on + strand, within MPMX26_02105at 2159.717 kb on + strand, within MPMX26_02105at 2159.783 kb on + strand, within MPMX26_02105at 2159.785 kb on + strand, within MPMX26_02105at 2159.785 kb on + strand, within MPMX26_02105at 2159.785 kb on + strand, within MPMX26_02105at 2159.785 kb on + strand, within MPMX26_02105at 2159.785 kb on + strand, within MPMX26_02105at 2159.919 kb on + strand, within MPMX26_02105at 2159.919 kb on + strand, within MPMX26_02105at 2159.948 kb on + strand, within MPMX26_02105at 2159.949 kb on + strand, within MPMX26_02105at 2159.976 kb on + strand, within MPMX26_02105at 2159.991 kb on + strand, within MPMX26_02105at 2160.037 kb on + strand, within MPMX26_02105at 2160.049 kb on + strandat 2160.084 kb on + strandat 2160.084 kb on + strandat 2160.177 kb on + strandat 2160.177 kb on + strandat 2160.237 kb on + strand, within MPMX26_02106at 2160.237 kb on + strand, within MPMX26_02106at 2160.237 kb on + strand, within MPMX26_02106at 2160.237 kb on + strand, within MPMX26_02106at 2160.237 kb on + strand, within MPMX26_02106

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
remove
2,157,610 + +0.3
2,157,610 + -0.8
2,157,643 + +0.1
2,157,643 + -0.1
2,157,697 + +0.0
2,157,727 + MPMX26_02103 0.12 +0.0
2,157,737 + MPMX26_02103 0.13 +0.1
2,157,740 + MPMX26_02103 0.13 +0.3
2,157,745 + MPMX26_02103 0.14 +0.5
2,157,754 + MPMX26_02103 0.15 -0.4
2,157,761 + MPMX26_02103 0.16 -0.0
2,157,763 + MPMX26_02103 0.16 -0.1
2,157,763 + MPMX26_02103 0.16 -0.0
2,157,763 + MPMX26_02103 0.16 +0.4
2,157,787 + MPMX26_02103 0.18 -0.4
2,157,797 + MPMX26_02103 0.20 +0.4
2,157,797 + MPMX26_02103 0.20 -0.3
2,157,838 + MPMX26_02103 0.24 +0.4
2,157,850 + MPMX26_02103 0.25 +0.1
2,157,861 + MPMX26_02103 0.26 +0.7
2,157,869 + MPMX26_02103 0.27 +0.1
2,157,925 + MPMX26_02103 0.33 +0.7
2,157,981 + MPMX26_02103 0.39 -0.3
2,157,981 + MPMX26_02103 0.39 +0.8
2,158,007 + MPMX26_02103 0.42 -0.2
2,158,007 + MPMX26_02103 0.42 +0.3
2,158,007 + MPMX26_02103 0.42 -0.1
2,158,007 + MPMX26_02103 0.42 -0.1
2,158,007 + MPMX26_02103 0.42 +0.3
2,158,007 + MPMX26_02103 0.42 +0.0
2,158,007 + MPMX26_02103 0.42 +0.2
2,158,007 + MPMX26_02103 0.42 +0.1
2,158,007 + MPMX26_02103 0.42 -0.5
2,158,007 + MPMX26_02103 0.42 -0.1
2,158,007 + MPMX26_02103 0.42 +0.7
2,158,007 + MPMX26_02103 0.42 -0.1
2,158,014 + MPMX26_02103 0.43 +0.0
2,158,060 + MPMX26_02103 0.48 +0.1
2,158,104 + MPMX26_02103 0.52 +0.4
2,158,116 + MPMX26_02103 0.54 -0.6
2,158,116 + MPMX26_02103 0.54 -0.1
2,158,116 + MPMX26_02103 0.54 -0.1
2,158,116 + MPMX26_02103 0.54 +1.1
2,158,116 + MPMX26_02103 0.54 -0.2
2,158,121 + MPMX26_02103 0.54 -0.1
2,158,131 + MPMX26_02103 0.55 +0.5
2,158,173 + MPMX26_02103 0.60 +0.8
2,158,321 + MPMX26_02103 0.76 +0.0
2,158,321 + MPMX26_02103 0.76 +0.2
2,158,330 + MPMX26_02103 0.76 -0.9
2,158,432 + MPMX26_02103 0.87 -0.2
2,158,432 + MPMX26_02103 0.87 +0.2
2,158,432 + MPMX26_02103 0.87 +0.5
2,158,432 + MPMX26_02103 0.87 +0.3
2,158,472 + +0.3
2,158,614 + +0.3
2,158,614 + +0.9
2,158,621 + -0.0
2,158,626 + MPMX26_02104 0.10 +0.3
2,158,632 + MPMX26_02104 0.11 -0.0
2,158,632 + MPMX26_02104 0.11 +0.4
2,158,699 + MPMX26_02104 0.20 +0.2
2,158,712 + MPMX26_02104 0.21 -0.2
2,158,727 + MPMX26_02104 0.23 -0.6
2,158,746 + MPMX26_02104 0.26 +0.3
2,158,780 + MPMX26_02104 0.30 -0.0
2,158,841 + MPMX26_02104 0.38 +0.7
2,158,854 + MPMX26_02104 0.40 +0.5
2,158,888 + MPMX26_02104 0.44 +0.6
2,158,898 + MPMX26_02104 0.45 +0.1
2,158,900 + MPMX26_02104 0.46 +0.4
2,158,900 + MPMX26_02104 0.46 -0.4
2,158,900 + MPMX26_02104 0.46 +0.1
2,158,905 + MPMX26_02104 0.46 +0.4
2,158,905 + MPMX26_02104 0.46 -0.0
2,158,905 + MPMX26_02104 0.46 +0.3
2,158,910 + MPMX26_02104 0.47 -1.9
2,158,945 + MPMX26_02104 0.52 +0.4
2,158,945 + MPMX26_02104 0.52 +0.2
2,158,945 + MPMX26_02104 0.52 +0.9
2,158,950 + MPMX26_02104 0.52 +0.4
2,159,001 + MPMX26_02104 0.59 +0.2
2,159,001 + MPMX26_02104 0.59 -0.7
2,159,097 + MPMX26_02104 0.71 +0.1
2,159,097 + MPMX26_02104 0.71 +0.0
2,159,101 + MPMX26_02104 0.72 -0.1
2,159,104 + MPMX26_02104 0.72 -0.0
2,159,152 + MPMX26_02104 0.78 +1.5
2,159,178 + MPMX26_02104 0.82 +0.4
2,159,248 + +0.3
2,159,248 + -1.6
2,159,248 + -0.2
2,159,253 + -0.1
2,159,253 + +0.4
2,159,263 + -0.0
2,159,310 + -0.0
2,159,320 + +0.2
2,159,405 + MPMX26_02105 0.11 +0.3
2,159,405 + MPMX26_02105 0.11 +0.2
2,159,405 + MPMX26_02105 0.11 -1.3
2,159,405 + MPMX26_02105 0.11 +1.0
2,159,415 + MPMX26_02105 0.12 +0.0
2,159,415 + MPMX26_02105 0.12 -0.5
2,159,415 + MPMX26_02105 0.12 -1.2
2,159,415 + MPMX26_02105 0.12 +0.3
2,159,426 + MPMX26_02105 0.14 +0.8
2,159,445 + MPMX26_02105 0.16 -0.1
2,159,445 + MPMX26_02105 0.16 -1.3
2,159,445 + MPMX26_02105 0.16 +0.8
2,159,445 + MPMX26_02105 0.16 +0.2
2,159,445 + MPMX26_02105 0.16 +0.1
2,159,445 + MPMX26_02105 0.16 +0.5
2,159,445 + MPMX26_02105 0.16 -0.2
2,159,445 + MPMX26_02105 0.16 +0.0
2,159,445 + MPMX26_02105 0.16 +0.3
2,159,445 + MPMX26_02105 0.16 -0.1
2,159,445 + MPMX26_02105 0.16 -0.1
2,159,499 + MPMX26_02105 0.23 +0.3
2,159,519 + MPMX26_02105 0.25 +0.8
2,159,717 + MPMX26_02105 0.49 -1.1
2,159,783 + MPMX26_02105 0.57 -0.1
2,159,785 + MPMX26_02105 0.58 +1.2
2,159,785 + MPMX26_02105 0.58 -0.5
2,159,785 + MPMX26_02105 0.58 -0.2
2,159,785 + MPMX26_02105 0.58 -1.1
2,159,785 + MPMX26_02105 0.58 +1.4
2,159,919 + MPMX26_02105 0.74 +0.1
2,159,919 + MPMX26_02105 0.74 -0.0
2,159,948 + MPMX26_02105 0.78 +0.2
2,159,949 + MPMX26_02105 0.78 +0.4
2,159,976 + MPMX26_02105 0.81 +0.8
2,159,991 + MPMX26_02105 0.83 -0.4
2,160,037 + MPMX26_02105 0.89 +1.0
2,160,049 + +1.8
2,160,084 + -0.1
2,160,084 + +1.7
2,160,177 + +0.0
2,160,177 + +0.4
2,160,237 + MPMX26_02106 0.13 +0.4
2,160,237 + MPMX26_02106 0.13 -0.4
2,160,237 + MPMX26_02106 0.13 +0.1
2,160,237 + MPMX26_02106 0.13 -0.6
2,160,237 + MPMX26_02106 0.13 +0.4

Or see this region's nucleotide sequence