Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01483 and MPMX26_01484 are separated by 18 nucleotides MPMX26_01484 and MPMX26_01485 are separated by 264 nucleotides MPMX26_01485 and MPMX26_01486 are separated by 213 nucleotides
MPMX26_01483: MPMX26_01483 - Diguanylate cyclase DgcP, at 1,540,510 to 1,541,445
_01483
MPMX26_01484: MPMX26_01484 - hypothetical protein, at 1,541,464 to 1,541,841
_01484
MPMX26_01485: MPMX26_01485 - hypothetical protein, at 1,542,106 to 1,542,588
_01485
MPMX26_01486: MPMX26_01486 - hypothetical protein, at 1,542,802 to 1,544,409
_01486
Position (kb)
1542
1543 Strain fitness (log2 ratio)
-1
0
1
2 at 1541.145 kb on - strand, within MPMX26_01483 at 1541.155 kb on - strand, within MPMX26_01483 at 1541.155 kb on - strand, within MPMX26_01483 at 1541.199 kb on - strand, within MPMX26_01483 at 1541.205 kb on - strand, within MPMX26_01483 at 1541.325 kb on - strand, within MPMX26_01483 at 1541.347 kb on - strand, within MPMX26_01483 at 1541.400 kb on - strand at 1541.400 kb on - strand at 1542.154 kb on + strand at 1542.156 kb on + strand, within MPMX26_01485 at 1542.163 kb on + strand, within MPMX26_01485 at 1542.168 kb on + strand, within MPMX26_01485 at 1542.168 kb on + strand, within MPMX26_01485 at 1542.168 kb on + strand, within MPMX26_01485 at 1542.168 kb on + strand, within MPMX26_01485 at 1542.168 kb on + strand, within MPMX26_01485 at 1542.178 kb on + strand, within MPMX26_01485 at 1542.264 kb on + strand, within MPMX26_01485 at 1542.480 kb on + strand, within MPMX26_01485 at 1542.484 kb on + strand, within MPMX26_01485
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,541,145 - MPMX26_01483 0.68 +1.3 1,541,155 - MPMX26_01483 0.69 +1.8 1,541,155 - MPMX26_01483 0.69 -0.3 1,541,199 - MPMX26_01483 0.74 +0.2 1,541,205 - MPMX26_01483 0.74 +0.4 1,541,325 - MPMX26_01483 0.87 +2.3 1,541,347 - MPMX26_01483 0.89 -1.1 1,541,400 - +0.0 1,541,400 - +0.1 1,542,154 + +0.1 1,542,156 + MPMX26_01485 0.10 +0.3 1,542,163 + MPMX26_01485 0.12 -0.4 1,542,168 + MPMX26_01485 0.13 -0.3 1,542,168 + MPMX26_01485 0.13 -1.1 1,542,168 + MPMX26_01485 0.13 +0.7 1,542,168 + MPMX26_01485 0.13 +0.1 1,542,168 + MPMX26_01485 0.13 +0.2 1,542,178 + MPMX26_01485 0.15 -0.8 1,542,264 + MPMX26_01485 0.33 -0.2 1,542,480 + MPMX26_01485 0.77 -0.0 1,542,484 + MPMX26_01485 0.78 -0.2
Or see this region's nucleotide sequence