Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01485

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01483 and MPMX26_01484 are separated by 18 nucleotidesMPMX26_01484 and MPMX26_01485 are separated by 264 nucleotidesMPMX26_01485 and MPMX26_01486 are separated by 213 nucleotides MPMX26_01483: MPMX26_01483 - Diguanylate cyclase DgcP, at 1,540,510 to 1,541,445 _01483 MPMX26_01484: MPMX26_01484 - hypothetical protein, at 1,541,464 to 1,541,841 _01484 MPMX26_01485: MPMX26_01485 - hypothetical protein, at 1,542,106 to 1,542,588 _01485 MPMX26_01486: MPMX26_01486 - hypothetical protein, at 1,542,802 to 1,544,409 _01486 Position (kb) 1542 1543Strain fitness (log2 ratio) -1 0 1 2at 1541.145 kb on - strand, within MPMX26_01483at 1541.155 kb on - strand, within MPMX26_01483at 1541.155 kb on - strand, within MPMX26_01483at 1541.199 kb on - strand, within MPMX26_01483at 1541.205 kb on - strand, within MPMX26_01483at 1541.325 kb on - strand, within MPMX26_01483at 1541.347 kb on - strand, within MPMX26_01483at 1541.400 kb on - strandat 1541.400 kb on - strandat 1542.154 kb on + strandat 1542.156 kb on + strand, within MPMX26_01485at 1542.163 kb on + strand, within MPMX26_01485at 1542.168 kb on + strand, within MPMX26_01485at 1542.168 kb on + strand, within MPMX26_01485at 1542.168 kb on + strand, within MPMX26_01485at 1542.168 kb on + strand, within MPMX26_01485at 1542.168 kb on + strand, within MPMX26_01485at 1542.178 kb on + strand, within MPMX26_01485at 1542.264 kb on + strand, within MPMX26_01485at 1542.480 kb on + strand, within MPMX26_01485at 1542.484 kb on + strand, within MPMX26_01485

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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1,541,145 - MPMX26_01483 0.68 +1.3
1,541,155 - MPMX26_01483 0.69 +1.8
1,541,155 - MPMX26_01483 0.69 -0.3
1,541,199 - MPMX26_01483 0.74 +0.2
1,541,205 - MPMX26_01483 0.74 +0.4
1,541,325 - MPMX26_01483 0.87 +2.3
1,541,347 - MPMX26_01483 0.89 -1.1
1,541,400 - +0.0
1,541,400 - +0.1
1,542,154 + +0.1
1,542,156 + MPMX26_01485 0.10 +0.3
1,542,163 + MPMX26_01485 0.12 -0.4
1,542,168 + MPMX26_01485 0.13 -0.3
1,542,168 + MPMX26_01485 0.13 -1.1
1,542,168 + MPMX26_01485 0.13 +0.7
1,542,168 + MPMX26_01485 0.13 +0.1
1,542,168 + MPMX26_01485 0.13 +0.2
1,542,178 + MPMX26_01485 0.15 -0.8
1,542,264 + MPMX26_01485 0.33 -0.2
1,542,480 + MPMX26_01485 0.77 -0.0
1,542,484 + MPMX26_01485 0.78 -0.2

Or see this region's nucleotide sequence