Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01319 and MPMX26_01320 are separated by 228 nucleotides MPMX26_01320 and MPMX26_01321 are separated by 64 nucleotides MPMX26_01321 and MPMX26_01322 are separated by 53 nucleotides MPMX26_01322 and MPMX26_01323 are separated by 17 nucleotides
MPMX26_01319: MPMX26_01319 - Transcription-repair-coupling factor, at 1,392,592 to 1,396,095
_01319
MPMX26_01320: MPMX26_01320 - hypothetical protein, at 1,396,324 to 1,396,758
_01320
MPMX26_01321: MPMX26_01321 - hypothetical protein, at 1,396,823 to 1,398,331
_01321
MPMX26_01322: MPMX26_01322 - 2Fe-2S ferredoxin, at 1,398,385 to 1,398,723
_01322
MPMX26_01323: MPMX26_01323 - Chaperone protein HscA, at 1,398,741 to 1,400,600
_01323
Position (kb)
1396
1397
1398
1399 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1395.823 kb on + strand at 1395.825 kb on + strand at 1395.885 kb on + strand at 1395.921 kb on + strand at 1395.921 kb on + strand at 1395.921 kb on + strand at 1395.949 kb on + strand at 1395.994 kb on + strand at 1396.008 kb on + strand at 1396.009 kb on + strand at 1396.009 kb on + strand at 1396.014 kb on + strand at 1396.071 kb on + strand at 1396.416 kb on + strand, within MPMX26_01320 at 1396.421 kb on + strand, within MPMX26_01320 at 1396.421 kb on + strand, within MPMX26_01320 at 1396.421 kb on + strand, within MPMX26_01320 at 1396.437 kb on + strand, within MPMX26_01320 at 1396.470 kb on + strand, within MPMX26_01320 at 1396.470 kb on + strand, within MPMX26_01320 at 1396.536 kb on + strand, within MPMX26_01320 at 1396.536 kb on + strand, within MPMX26_01320 at 1396.536 kb on + strand, within MPMX26_01320 at 1396.564 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.632 kb on + strand, within MPMX26_01320 at 1396.642 kb on + strand, within MPMX26_01320 at 1396.642 kb on + strand, within MPMX26_01320 at 1396.642 kb on + strand, within MPMX26_01320 at 1396.642 kb on + strand, within MPMX26_01320 at 1396.647 kb on + strand, within MPMX26_01320 at 1396.657 kb on + strand, within MPMX26_01320 at 1396.657 kb on + strand, within MPMX26_01320 at 1396.657 kb on + strand, within MPMX26_01320 at 1396.657 kb on + strand, within MPMX26_01320 at 1396.662 kb on + strand, within MPMX26_01320 at 1396.684 kb on + strand, within MPMX26_01320 at 1396.692 kb on + strand, within MPMX26_01320 at 1396.700 kb on + strand, within MPMX26_01320 at 1396.700 kb on + strand, within MPMX26_01320 at 1396.715 kb on + strand at 1396.725 kb on + strand at 1396.725 kb on + strand at 1396.725 kb on + strand at 1396.727 kb on + strand at 1396.771 kb on + strand at 1396.771 kb on + strand at 1396.771 kb on + strand at 1396.771 kb on + strand at 1396.771 kb on + strand at 1396.771 kb on + strand at 1396.771 kb on + strand at 1396.771 kb on + strand at 1396.806 kb on + strand at 1396.815 kb on + strand at 1396.815 kb on + strand at 1396.815 kb on + strand at 1396.826 kb on + strand at 1396.849 kb on + strand at 1396.895 kb on + strand at 1396.903 kb on + strand at 1396.903 kb on + strand at 1396.903 kb on + strand at 1396.903 kb on + strand at 1396.903 kb on + strand at 1396.903 kb on + strand at 1396.937 kb on + strand at 1396.937 kb on + strand at 1397.013 kb on + strand, within MPMX26_01321 at 1397.013 kb on + strand, within MPMX26_01321 at 1397.099 kb on + strand, within MPMX26_01321 at 1397.435 kb on + strand, within MPMX26_01321 at 1397.807 kb on + strand, within MPMX26_01321 at 1397.815 kb on + strand, within MPMX26_01321 at 1397.822 kb on + strand, within MPMX26_01321 at 1397.903 kb on + strand, within MPMX26_01321 at 1397.906 kb on + strand, within MPMX26_01321 at 1398.160 kb on + strand, within MPMX26_01321 at 1398.190 kb on + strand at 1398.190 kb on + strand at 1398.190 kb on + strand at 1398.190 kb on + strand at 1398.190 kb on + strand at 1398.190 kb on + strand at 1398.190 kb on + strand at 1398.190 kb on + strand at 1398.275 kb on + strand at 1398.275 kb on + strand at 1398.275 kb on + strand at 1398.277 kb on + strand at 1398.836 kb on - strand at 1398.837 kb on - strand at 1398.843 kb on - strand at 1398.851 kb on - strand at 1398.853 kb on - strand at 1398.853 kb on - strand at 1398.853 kb on - strand at 1398.868 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 1,395,823 + +0.5 1,395,825 + +0.4 1,395,885 + -0.3 1,395,921 + -0.5 1,395,921 + +0.8 1,395,921 + +0.0 1,395,949 + -0.1 1,395,994 + +1.0 1,396,008 + +0.1 1,396,009 + -0.1 1,396,009 + -0.0 1,396,014 + -0.8 1,396,071 + +0.0 1,396,416 + MPMX26_01320 0.21 +0.5 1,396,421 + MPMX26_01320 0.22 -1.1 1,396,421 + MPMX26_01320 0.22 -0.7 1,396,421 + MPMX26_01320 0.22 -0.2 1,396,437 + MPMX26_01320 0.26 +0.0 1,396,470 + MPMX26_01320 0.34 +0.1 1,396,470 + MPMX26_01320 0.34 +1.0 1,396,536 + MPMX26_01320 0.49 -0.6 1,396,536 + MPMX26_01320 0.49 -0.3 1,396,536 + MPMX26_01320 0.49 +0.2 1,396,564 + MPMX26_01320 0.55 -0.4 1,396,632 + MPMX26_01320 0.71 -0.6 1,396,632 + MPMX26_01320 0.71 +0.7 1,396,632 + MPMX26_01320 0.71 -0.1 1,396,632 + MPMX26_01320 0.71 -0.9 1,396,632 + MPMX26_01320 0.71 -0.4 1,396,632 + MPMX26_01320 0.71 -1.6 1,396,632 + MPMX26_01320 0.71 -0.2 1,396,632 + MPMX26_01320 0.71 +0.6 1,396,632 + MPMX26_01320 0.71 -0.3 1,396,632 + MPMX26_01320 0.71 +0.0 1,396,632 + MPMX26_01320 0.71 +1.0 1,396,632 + MPMX26_01320 0.71 +0.7 1,396,632 + MPMX26_01320 0.71 +0.7 1,396,632 + MPMX26_01320 0.71 -1.7 1,396,632 + MPMX26_01320 0.71 +0.2 1,396,632 + MPMX26_01320 0.71 -0.2 1,396,632 + MPMX26_01320 0.71 -0.4 1,396,632 + MPMX26_01320 0.71 +0.2 1,396,632 + MPMX26_01320 0.71 -0.3 1,396,632 + MPMX26_01320 0.71 -0.3 1,396,632 + MPMX26_01320 0.71 -0.2 1,396,642 + MPMX26_01320 0.73 -0.0 1,396,642 + MPMX26_01320 0.73 -2.0 1,396,642 + MPMX26_01320 0.73 +0.4 1,396,642 + MPMX26_01320 0.73 -1.5 1,396,647 + MPMX26_01320 0.74 -0.6 1,396,657 + MPMX26_01320 0.77 -2.0 1,396,657 + MPMX26_01320 0.77 +0.1 1,396,657 + MPMX26_01320 0.77 -0.2 1,396,657 + MPMX26_01320 0.77 +0.4 1,396,662 + MPMX26_01320 0.78 -1.4 1,396,684 + MPMX26_01320 0.83 -0.2 1,396,692 + MPMX26_01320 0.85 -2.0 1,396,700 + MPMX26_01320 0.86 -0.4 1,396,700 + MPMX26_01320 0.86 +2.0 1,396,715 + +0.7 1,396,725 + -1.6 1,396,725 + +1.0 1,396,725 + -0.1 1,396,727 + +0.2 1,396,771 + -0.3 1,396,771 + -0.2 1,396,771 + +0.9 1,396,771 + +0.2 1,396,771 + +1.0 1,396,771 + +0.2 1,396,771 + +0.0 1,396,771 + +0.4 1,396,806 + -1.5 1,396,815 + +0.2 1,396,815 + +0.9 1,396,815 + -0.1 1,396,826 + +0.3 1,396,849 + -0.4 1,396,895 + -1.1 1,396,903 + -0.3 1,396,903 + -0.1 1,396,903 + -0.0 1,396,903 + -0.3 1,396,903 + -0.5 1,396,903 + -0.3 1,396,937 + -0.2 1,396,937 + +0.6 1,397,013 + MPMX26_01321 0.13 -0.4 1,397,013 + MPMX26_01321 0.13 -0.9 1,397,099 + MPMX26_01321 0.18 -0.3 1,397,435 + MPMX26_01321 0.41 -0.6 1,397,807 + MPMX26_01321 0.65 -0.1 1,397,815 + MPMX26_01321 0.66 +2.0 1,397,822 + MPMX26_01321 0.66 -1.4 1,397,903 + MPMX26_01321 0.72 -0.6 1,397,906 + MPMX26_01321 0.72 +0.2 1,398,160 + MPMX26_01321 0.89 -0.7 1,398,190 + -0.5 1,398,190 + -0.1 1,398,190 + -0.7 1,398,190 + -0.4 1,398,190 + -0.1 1,398,190 + -1.3 1,398,190 + +0.1 1,398,190 + +0.2 1,398,275 + -0.2 1,398,275 + -0.3 1,398,275 + +1.4 1,398,277 + +1.0 1,398,836 - -4.0 1,398,837 - -2.2 1,398,843 - -0.9 1,398,851 - -3.5 1,398,853 - -0.8 1,398,853 - -1.6 1,398,853 - -2.4 1,398,868 - -0.6
Or see this region's nucleotide sequence