Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00484

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00483 and MPMX26_00484 are separated by 234 nucleotidesMPMX26_00484 and MPMX26_00485 overlap by 4 nucleotidesMPMX26_00485 and MPMX26_00486 are separated by 83 nucleotidesMPMX26_00486 and MPMX26_00487 are separated by 113 nucleotides MPMX26_00483: MPMX26_00483 - hypothetical protein, at 525,010 to 526,200 _00483 MPMX26_00484: MPMX26_00484 - hypothetical protein, at 526,435 to 526,791 _00484 MPMX26_00485: MPMX26_00485 - hypothetical protein, at 526,788 to 526,916 _00485 MPMX26_00486: MPMX26_00486 - hypothetical protein, at 527,000 to 527,638 _00486 MPMX26_00487: MPMX26_00487 - hypothetical protein, at 527,752 to 527,982 _00487 Position (kb) 526 527Strain fitness (log2 ratio) -1 0 1at 525.456 kb on + strand, within MPMX26_00483at 525.466 kb on + strand, within MPMX26_00483at 525.472 kb on + strand, within MPMX26_00483at 525.486 kb on + strand, within MPMX26_00483at 525.529 kb on + strand, within MPMX26_00483at 525.535 kb on + strand, within MPMX26_00483at 525.535 kb on + strand, within MPMX26_00483at 525.540 kb on + strand, within MPMX26_00483at 525.548 kb on + strand, within MPMX26_00483at 525.550 kb on + strand, within MPMX26_00483at 525.550 kb on + strand, within MPMX26_00483at 525.558 kb on + strand, within MPMX26_00483at 525.558 kb on + strand, within MPMX26_00483at 525.582 kb on + strand, within MPMX26_00483at 525.601 kb on + strand, within MPMX26_00483at 525.606 kb on + strand, within MPMX26_00483at 525.703 kb on + strand, within MPMX26_00483at 525.791 kb on + strand, within MPMX26_00483at 525.893 kb on + strand, within MPMX26_00483at 526.027 kb on + strand, within MPMX26_00483at 526.032 kb on + strand, within MPMX26_00483at 526.064 kb on - strand, within MPMX26_00483at 526.075 kb on + strand, within MPMX26_00483at 526.075 kb on + strand, within MPMX26_00483at 526.075 kb on + strand, within MPMX26_00483at 526.147 kb on + strandat 526.381 kb on + strandat 526.424 kb on + strandat 526.478 kb on + strand, within MPMX26_00484at 526.649 kb on + strand, within MPMX26_00484at 526.649 kb on + strand, within MPMX26_00484at 526.649 kb on + strand, within MPMX26_00484at 526.649 kb on + strand, within MPMX26_00484at 526.663 kb on + strand, within MPMX26_00484at 526.720 kb on + strand, within MPMX26_00484at 526.865 kb on + strand, within MPMX26_00485at 526.865 kb on + strand, within MPMX26_00485at 526.898 kb on + strand, within MPMX26_00485at 526.941 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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525,456 + MPMX26_00483 0.37 +0.2
525,466 + MPMX26_00483 0.38 -0.3
525,472 + MPMX26_00483 0.39 +0.0
525,486 + MPMX26_00483 0.40 +0.3
525,529 + MPMX26_00483 0.44 +0.6
525,535 + MPMX26_00483 0.44 -0.4
525,535 + MPMX26_00483 0.44 +0.1
525,540 + MPMX26_00483 0.45 +0.4
525,548 + MPMX26_00483 0.45 +0.2
525,550 + MPMX26_00483 0.45 -0.6
525,550 + MPMX26_00483 0.45 -0.8
525,558 + MPMX26_00483 0.46 -0.2
525,558 + MPMX26_00483 0.46 -0.1
525,582 + MPMX26_00483 0.48 +0.1
525,601 + MPMX26_00483 0.50 +1.6
525,606 + MPMX26_00483 0.50 -0.4
525,703 + MPMX26_00483 0.58 -0.1
525,791 + MPMX26_00483 0.66 +0.5
525,893 + MPMX26_00483 0.74 +1.4
526,027 + MPMX26_00483 0.85 +0.6
526,032 + MPMX26_00483 0.86 +0.5
526,064 - MPMX26_00483 0.88 -0.9
526,075 + MPMX26_00483 0.89 -0.4
526,075 + MPMX26_00483 0.89 -0.3
526,075 + MPMX26_00483 0.89 -0.0
526,147 + +0.0
526,381 + -0.2
526,424 + -0.1
526,478 + MPMX26_00484 0.12 +0.1
526,649 + MPMX26_00484 0.60 -0.2
526,649 + MPMX26_00484 0.60 +0.3
526,649 + MPMX26_00484 0.60 +0.0
526,649 + MPMX26_00484 0.60 +0.2
526,663 + MPMX26_00484 0.64 +0.2
526,720 + MPMX26_00484 0.80 +0.5
526,865 + MPMX26_00485 0.60 -0.7
526,865 + MPMX26_00485 0.60 -0.1
526,898 + MPMX26_00485 0.85 +0.1
526,941 + -0.1

Or see this region's nucleotide sequence