Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF762

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
455,172	+				-0.8
455,233	+				-0.8
455,233	+				+0.5
455,233	+				-0.5
455,233	+				+0.1
455,234	-				+0.6
455,234	-				+0.1
455,234	-				+1.0
455,234	-				-0.1
455,234	-				-0.8
455,234	-				+1.6
455,234	-				+0.7
455,234	-				+1.1
455,236	-				+0.1
455,252	-				-0.3
455,252	-				+0.1
455,252	-				-1.2
455,252	-				-1.6
455,412	+		GFF762	0.13	-1.3
455,779	-		GFF762	0.79	+0.3
455,779	-		GFF762	0.79	-0.2
455,787	+		GFF762	0.80	-0.2
455,787	+		GFF762	0.80	-0.6
455,788	-		GFF762	0.80	-1.0
455,913	-				+0.2
455,913	-				-0.5
456,117	-		GFF763	0.15	-0.2
456,227	+		GFF763	0.23	+0.2
456,228	-		GFF763	0.23	-0.0
456,228	-		GFF763	0.23	+0.4
456,228	-		GFF763	0.23	+0.5
456,228	-		GFF763	0.23	+0.8
456,380	+		GFF763	0.34	-0.2
456,380	+		GFF763	0.34	-0.0
456,380	+		GFF763	0.34	+0.1
456,381	-		GFF763	0.34	+0.6