Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF726

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
404,996	+		GFF724	0.78	-0.0
404,996	+		GFF724	0.78	+0.1
404,997	-		GFF724	0.78	-0.7
404,997	-		GFF724	0.78	-1.0
404,997	-		GFF724	0.78	-0.7
404,997	-		GFF724	0.78	+1.2
404,997	-		GFF724	0.78	-0.7
405,008	+		GFF724	0.79	+1.0
405,009	-		GFF724	0.79	-1.9
405,009	-		GFF724	0.79	-0.8
405,105	-		GFF724	0.88	-0.8
405,280	+				-0.7
405,280	+				-1.0
405,763	+				+0.0
405,764	-				-0.3
405,775	+				-0.8
406,075	+		GFF726	0.34	+0.1
406,075	+		GFF726	0.34	+0.1
406,076	+		GFF726	0.34	+0.2
406,076	+		GFF726	0.34	-0.8
406,076	+		GFF726	0.34	-0.0
406,077	-		GFF726	0.34	+0.2
406,077	-		GFF726	0.34	+0.3
406,364	+		GFF726	0.68	+0.3
406,365	-		GFF726	0.69	+0.2
406,365	-		GFF726	0.69	+1.1
406,365	-		GFF726	0.69	-0.1
406,670	+				-0.4
406,671	-				-0.1
406,726	+				+0.1
406,789	+		GFF727	0.25	-0.5
406,789	+		GFF727	0.25	-0.4
406,790	-		GFF727	0.25	+1.0
406,790	-		GFF727	0.25	-0.4
406,790	-		GFF727	0.25	-0.3
406,790	-		GFF727	0.25	+0.0
406,916	-		GFF727	0.71	+0.3
407,295	+		GFF728	0.17	-1.1
407,296	-		GFF728	0.17	-1.4
407,328	+		GFF728	0.20	-0.0
407,520	+		GFF728	0.35	-0.1
407,520	+		GFF728	0.35	+1.8
407,520	+		GFF728	0.35	+0.1
407,520	+		GFF728	0.35	+0.1
407,520	+		GFF728	0.35	-0.2
407,521	-		GFF728	0.35	-0.2
407,521	-		GFF728	0.35	-0.2
407,521	-		GFF728	0.35	-0.1