Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5294

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
2,305,503	+				-0.4
2,306,211	+		GFF5293	0.72	-0.9
2,306,298	+		GFF5293	0.80	+0.1
2,306,615	+		GFF5294	0.16	-0.8
2,306,694	-		GFF5294	0.27	-0.7
2,306,783	+		GFF5294	0.40	-1.8
2,307,000	-		GFF5294	0.71	-0.5
2,307,066	-		GFF5294	0.81	-0.9
2,307,066	-		GFF5294	0.81	+0.9
2,307,071	+		GFF5294	0.82	+0.3
2,307,071	+		GFF5294	0.82	-0.9
2,307,072	-		GFF5294	0.82	-0.6
2,307,543	-		GFF5295	0.34	+0.0
2,307,568	-		GFF5295	0.37	-0.1
2,307,871	+		GFF5295	0.71	+0.3
2,308,027	-		GFF5295	0.89	-0.1
2,308,042	-				-0.2
2,308,089	+				-0.2
2,308,090	-				+0.5
2,308,092	+				+0.4
2,308,186	+				-0.1