Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4467

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
1,393,374	+		GFF4465	0.82	+0.4
1,393,739	+		GFF4466	0.12	-0.7
1,393,740	-		GFF4466	0.12	-0.1
1,393,751	+		GFF4466	0.14	+0.8
1,393,752	-		GFF4466	0.14	-0.2
1,393,797	-		GFF4466	0.21	+0.0
1,393,797	-		GFF4466	0.21	-0.1
1,394,091	-		GFF4466	0.70	-0.5
1,394,186	+		GFF4466	0.85	+0.5
1,394,187	-		GFF4466	0.85	-0.6
1,394,187	-		GFF4466	0.85	-0.6
1,394,888	+		GFF4467	0.78	-0.4
1,394,889	-		GFF4467	0.78	+0.7
1,394,889	-		GFF4467	0.78	+1.3
1,394,889	-		GFF4467	0.78	+0.6
1,394,913	-		GFF4467	0.81	+0.1
1,394,913	-		GFF4467	0.81	+0.7
1,394,913	-		GFF4467	0.81	-0.2
1,395,265	+				+0.2
1,395,266	-				-0.8
1,395,266	-				-1.7
1,395,461	-		GFF4468	0.19	-0.5
1,395,500	-		GFF4468	0.22	-0.1
1,395,500	-		GFF4468	0.22	-0.1
1,395,800	-		GFF4468	0.40	-1.0
1,395,800	-		GFF4468	0.40	-0.3
1,395,854	-		GFF4468	0.43	+0.1
1,395,854	-		GFF4468	0.43	+0.1
1,395,940	+		GFF4468	0.49	+0.2
1,395,941	-		GFF4468	0.49	-0.6