Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4324

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
1,251,758	+		GFF4323	0.22	-0.5
1,251,758	+		GFF4323	0.22	+0.6
1,251,758	+		GFF4323	0.22	-0.4
1,251,758	+		GFF4323	0.22	-0.4
1,251,759	-		GFF4323	0.22	+1.2
1,251,759	-		GFF4323	0.22	+0.6
1,251,995	+		GFF4323	0.48	-1.3
1,252,287	-		GFF4323	0.79	+0.5
1,252,379	+		GFF4323	0.89	-0.8
1,252,379	+		GFF4323	0.89	-0.4
1,252,379	+		GFF4323	0.89	-0.6
1,252,379	+		GFF4323	0.89	-0.2
1,252,379	+		GFF4323	0.89	-0.4
1,252,379	+		GFF4323	0.89	-0.0
1,252,379	+		GFF4323	0.89	+0.2
1,252,380	-		GFF4323	0.89	+0.1
1,252,380	-		GFF4323	0.89	+0.7
1,252,380	-		GFF4323	0.89	-0.1
1,252,984	+		GFF4324	0.35	-0.4
1,253,020	+		GFF4324	0.38	-0.2
1,253,020	+		GFF4324	0.38	-0.7
1,253,020	+		GFF4324	0.38	-1.3
1,253,021	-		GFF4324	0.38	+0.1
1,253,177	-		GFF4324	0.51	-0.4
1,253,369	-		GFF4324	0.68	-0.3
1,253,369	-		GFF4324	0.68	+0.1
1,253,495	-		GFF4324	0.79	+0.1
1,253,624	-		GFF4324	0.90	-1.7
1,253,635	+				+0.9
1,253,635	+				-0.6
1,253,636	-				+0.2
1,253,636	-				-0.2
1,253,636	-				+0.8
1,253,680	+				+0.1
1,253,681	-				+1.3
1,254,108	+		GFF4325	0.28	+0.0
1,254,109	-		GFF4325	0.28	+0.4
1,254,712	-		GFF4325	0.70	-0.3