Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF432

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
101,185	+		GFF430	0.24	+0.3
101,185	+		GFF430	0.24	+0.4
101,215	+		GFF430	0.31	-0.2
101,215	+		GFF430	0.31	+0.4
101,342	-		GFF430	0.62	+0.5
101,342	-		GFF430	0.62	-0.0
101,342	-		GFF430	0.62	-0.2
101,342	-		GFF430	0.62	-0.2
101,476	+				+1.2
101,476	+				-0.3
101,477	-				-0.7
101,477	-				+0.5
101,477	-				-0.3
101,520	+				-0.1
101,521	-				+0.8
101,718	+		GFF431	0.36	-0.3
102,132	+				-0.6
102,132	+				-0.6
102,133	-				+0.2
102,133	-				-0.0
102,232	-				-0.3
102,232	-				+0.1
102,415	-		GFF432	0.27	-1.2
102,465	+		GFF432	0.32	-1.0
102,466	-		GFF432	0.33	-0.0
102,466	-		GFF432	0.33	+0.6
102,705	+		GFF432	0.57	-2.2
102,706	-		GFF432	0.57	-0.5
102,971	-		GFF432	0.84	+0.4
102,971	-		GFF432	0.84	+1.0
103,125	+				+0.0
103,453	-		GFF433	0.33	-0.1
103,588	-		GFF433	0.47	+0.4
103,674	+		GFF433	0.56	+0.0
103,675	-		GFF433	0.56	+0.6
103,861	-		GFF433	0.75	-1.0