Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3056

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
134,433	+		GFF3055	0.40	+0.4
134,529	+		GFF3055	0.48	+0.0
134,529	+		GFF3055	0.48	+0.3
134,530	-		GFF3055	0.48	+0.5
134,530	-		GFF3055	0.48	+0.3
134,530	-		GFF3055	0.48	-0.1
134,530	-		GFF3055	0.48	-0.2
134,784	+		GFF3055	0.69	+0.4
134,961	+		GFF3055	0.84	+1.2
134,961	+		GFF3055	0.84	+0.2
134,962	-		GFF3055	0.84	+0.4
135,533	-		GFF3056	0.27	-0.7
135,533	-		GFF3056	0.27	-0.2
135,713	-		GFF3056	0.40	+0.3
136,072	+		GFF3056	0.66	-0.8
136,073	-		GFF3056	0.66	+0.5
136,402	+				+0.3
136,402	+				-0.4
137,012	-		GFF3057	0.44	+0.0
137,281	+		GFF3057	0.72	-0.3
137,282	-		GFF3057	0.72	-0.1
137,405	-		GFF3057	0.84	+1.6
137,461	+				-0.7
137,462	-				-0.1
137,483	-				-0.0