Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2933

Experiment: Ying_all64 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep B; time point 2
15,673	+				-0.0
15,673	+				-0.2
15,674	-				+0.1
15,674	-				-0.3
15,674	-				-0.5
15,707	+		GFF2932	0.13	+0.0
15,708	-		GFF2932	0.13	-0.2
15,708	-		GFF2932	0.13	-0.3
15,708	-		GFF2932	0.13	+0.1
16,007	+		GFF2932	0.45	+0.1
16,007	+		GFF2932	0.45	-0.7
16,008	-		GFF2932	0.45	+0.5
16,008	-		GFF2932	0.45	-0.6
16,008	-		GFF2932	0.45	-0.2
16,008	-		GFF2932	0.45	+0.3
16,008	-		GFF2932	0.45	-0.2
16,008	-		GFF2932	0.45	-0.1
16,008	-		GFF2932	0.45	-0.3
16,008	-		GFF2932	0.45	+0.3
16,274	+		GFF2932	0.73	+0.1
16,274	+		GFF2932	0.73	+0.0
16,274	+		GFF2932	0.73	-0.4
16,274	+		GFF2932	0.73	-0.1
16,274	+		GFF2932	0.73	+0.4
16,274	+		GFF2932	0.73	+1.0
16,274	+		GFF2932	0.73	+0.4
16,274	+		GFF2932	0.73	+0.2
16,274	+		GFF2932	0.73	+0.6
16,274	+		GFF2932	0.73	-2.2
16,274	+		GFF2932	0.73	+0.3
16,274	+		GFF2932	0.73	-0.1
16,275	-		GFF2932	0.73	-0.2
16,275	-		GFF2932	0.73	+0.4
16,275	-		GFF2932	0.73	-0.2
16,275	-		GFF2932	0.73	+0.1
16,275	-		GFF2932	0.73	-0.4
16,275	-		GFF2932	0.73	+1.5
16,275	-		GFF2932	0.73	-0.1
16,275	-		GFF2932	0.73	-0.7
16,275	-		GFF2932	0.73	+0.5
16,277	+		GFF2932	0.73	+0.1
16,277	+		GFF2932	0.73	+0.4
16,277	+		GFF2932	0.73	+0.3
16,277	+		GFF2932	0.73	+0.9
16,277	+		GFF2932	0.73	-0.6
16,277	+		GFF2932	0.73	-0.0
16,277	+		GFF2932	0.73	+0.4
16,277	+		GFF2932	0.73	+0.7
16,277	+		GFF2932	0.73	+0.8
16,277	+		GFF2932	0.73	+0.1
16,278	-		GFF2932	0.73	+0.3
16,278	-		GFF2932	0.73	-0.2
16,278	-		GFF2932	0.73	+0.3
16,278	-		GFF2932	0.73	-0.2
16,278	-		GFF2932	0.73	-0.3
16,278	-		GFF2932	0.73	+0.4
16,391	+		GFF2932	0.85	-0.3
16,392	-		GFF2932	0.85	-0.1
16,392	-		GFF2932	0.85	+0.6
16,392	-		GFF2932	0.85	-0.0
16,401	-		GFF2932	0.86	+0.0
16,401	-		GFF2932	0.86	-0.5
16,574	+				-0.3
16,574	+				-0.3
16,575	-				+0.6
16,575	-				-0.0
16,693	-				-0.4
17,037	+		GFF2933	0.58	+0.3
17,037	+		GFF2933	0.58	+0.1
17,037	+		GFF2933	0.58	-0.0
17,037	+		GFF2933	0.58	-0.1
17,037	+		GFF2933	0.58	+0.9
17,037	+		GFF2933	0.58	-1.2
17,038	-		GFF2933	0.58	+0.6
17,038	-		GFF2933	0.58	-0.0
17,038	-		GFF2933	0.58	-1.4
17,289	+				-0.4
17,289	+				+0.5
17,289	+				+1.6
17,290	-				-0.2