Strain Fitness in Pseudomonas sp. SVBP6 around COO64_RS18950

Experiment: Supernatant; Pseudomonas DC3000 grown in LB; 0.1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Pseudomonas DC3000 grown in LB; 0.1 X
112,642	+	htpG	COO64_RS18945	0.51	+0.6
112,643	-	htpG	COO64_RS18945	0.51	-0.4
112,804	+	htpG	COO64_RS18945	0.59	-0.1
112,804	+	htpG	COO64_RS18945	0.59	+0.9
112,804	+	htpG	COO64_RS18945	0.59	-0.2
112,805	-	htpG	COO64_RS18945	0.59	+1.1
112,805	-	htpG	COO64_RS18945	0.59	+0.9
112,805	-	htpG	COO64_RS18945	0.59	+1.2
112,805	-	htpG	COO64_RS18945	0.59	-0.4
112,805	-	htpG	COO64_RS18945	0.59	+0.9
112,805	-	htpG	COO64_RS18945	0.59	-0.1
112,805	-	htpG	COO64_RS18945	0.59	+1.1
112,805	-	htpG	COO64_RS18945	0.59	+0.2
112,805	-	htpG	COO64_RS18945	0.59	-0.5
112,948	+	htpG	COO64_RS18945	0.67	+0.1
112,948	+	htpG	COO64_RS18945	0.67	+0.2
112,984	+	htpG	COO64_RS18945	0.69	+0.0
112,984	+	htpG	COO64_RS18945	0.69	-0.6
112,984	+	htpG	COO64_RS18945	0.69	+0.3
112,984	+	htpG	COO64_RS18945	0.69	+0.4
112,984	+	htpG	COO64_RS18945	0.69	-1.4
112,984	+	htpG	COO64_RS18945	0.69	+0.9
112,984	+	htpG	COO64_RS18945	0.69	-0.5
112,984	+	htpG	COO64_RS18945	0.69	+0.7
112,985	-	htpG	COO64_RS18945	0.69	-0.1
112,985	-	htpG	COO64_RS18945	0.69	+1.2
113,005	+	htpG	COO64_RS18945	0.70	-1.6
113,005	+	htpG	COO64_RS18945	0.70	-0.4
113,006	-	htpG	COO64_RS18945	0.70	-0.5
113,104	+	htpG	COO64_RS18945	0.75	-0.9
113,104	+	htpG	COO64_RS18945	0.75	-1.2
113,104	+	htpG	COO64_RS18945	0.75	+0.3
113,104	+	htpG	COO64_RS18945	0.75	+0.3
113,104	+	htpG	COO64_RS18945	0.75	-1.8
113,104	+	htpG	COO64_RS18945	0.75	-0.7
113,104	+	htpG	COO64_RS18945	0.75	-0.3
113,104	+	htpG	COO64_RS18945	0.75	+0.2
113,104	+	htpG	COO64_RS18945	0.75	-0.3
113,105	-	htpG	COO64_RS18945	0.75	-0.5
113,536	+				+1.2
113,537	-				-0.0
113,558	+				-1.1
113,558	+				-0.1
113,559	-				-0.1
113,559	-				+0.5
113,578	+				+0.2
113,579	-				+0.9
113,579	-				+0.4
113,579	-				-0.5
113,582	+				+0.6
113,582	+				-0.3
113,582	+				-1.2
113,582	+				+0.4
113,582	+				+0.5
113,583	-				+0.9
113,583	-				-0.9
113,583	-				-0.0
113,583	-				-0.1
113,583	-				-2.6
113,583	-				+1.5
113,583	-				-0.8
113,667	+				+0.7
113,667	+				-0.5
113,667	+				+0.9
113,667	+				-0.4
113,667	+				+0.2
113,667	+				+0.5
113,667	+				-0.0
113,668	-				-0.3
113,668	-				+0.3
113,668	-				+0.3
113,668	-				-0.1
113,668	-				+1.3
113,668	-				-0.5
113,668	-				-0.4
113,668	-				-0.5
113,688	+				+0.3
113,688	+				+1.4
113,688	+				-0.1
113,688	+				-0.1
113,706	+				-0.3
113,706	+				+0.1
113,706	+				+0.4
113,707	-				-0.4
113,707	-				+0.1
113,707	-				-0.1
113,707	-				+0.6
113,707	-				-0.5
113,707	-				-0.2
113,783	+		COO64_RS18950	0.20	+0.1
113,783	+		COO64_RS18950	0.20	+1.2
113,784	-		COO64_RS18950	0.20	+0.6
113,784	-		COO64_RS18950	0.20	+0.6
113,811	+		COO64_RS18950	0.24	+0.2
113,811	+		COO64_RS18950	0.24	-0.1
113,811	+		COO64_RS18950	0.24	-0.5
113,811	+		COO64_RS18950	0.24	+1.3
113,811	+		COO64_RS18950	0.24	+0.7
113,811	+		COO64_RS18950	0.24	-0.2
113,811	+		COO64_RS18950	0.24	+0.3
113,812	-		COO64_RS18950	0.24	-0.3
113,812	-		COO64_RS18950	0.24	-0.5
113,812	-		COO64_RS18950	0.24	-0.3
113,812	-		COO64_RS18950	0.24	+0.9
113,812	-		COO64_RS18950	0.24	-0.8
113,835	+		COO64_RS18950	0.27	-1.1
113,835	+		COO64_RS18950	0.27	-0.5
113,835	+		COO64_RS18950	0.27	-0.1
113,836	-		COO64_RS18950	0.27	+1.1
114,231	+		COO64_RS18950	0.82	+0.3
114,231	+		COO64_RS18950	0.82	+0.9
114,231	+		COO64_RS18950	0.82	+0.3
114,231	+		COO64_RS18950	0.82	-1.8
114,232	-		COO64_RS18950	0.82	-0.1
114,232	-		COO64_RS18950	0.82	-0.4
114,232	-		COO64_RS18950	0.82	+0.1
114,232	-		COO64_RS18950	0.82	-0.2
114,273	-		COO64_RS18950	0.88	-0.0
114,291	+				-0.2
114,291	+				-0.9
114,292	-				+0.4
114,292	-				+0.5
114,644	+		COO64_RS18955	0.21	+0.8
114,644	+		COO64_RS18955	0.21	-0.1
114,644	+		COO64_RS18955	0.21	+1.6
114,644	+		COO64_RS18955	0.21	+0.3
114,644	+		COO64_RS18955	0.21	+0.5
114,645	-		COO64_RS18955	0.21	+0.9
114,645	-		COO64_RS18955	0.21	+0.1
114,645	-		COO64_RS18955	0.21	+0.1
114,730	+		COO64_RS18955	0.31	+1.2
114,730	+		COO64_RS18955	0.31	+1.3
114,730	+		COO64_RS18955	0.31	-0.1
114,730	+		COO64_RS18955	0.31	-0.5
114,730	+		COO64_RS18955	0.31	-0.4
114,731	-		COO64_RS18955	0.31	+1.1
114,731	-		COO64_RS18955	0.31	-0.2
114,734	+		COO64_RS18955	0.31	+0.9
114,734	+		COO64_RS18955	0.31	-0.0
114,734	+		COO64_RS18955	0.31	+0.2
114,734	+		COO64_RS18955	0.31	-0.9
114,734	+		COO64_RS18955	0.31	-1.3
114,734	+		COO64_RS18955	0.31	-0.8
114,734	+		COO64_RS18955	0.31	+2.9
114,734	+		COO64_RS18955	0.31	-0.3
114,735	-		COO64_RS18955	0.31	-0.2
114,735	-		COO64_RS18955	0.31	-0.0
114,735	-		COO64_RS18955	0.31	-0.0
114,735	-		COO64_RS18955	0.31	-2.5
114,735	-		COO64_RS18955	0.31	+0.2
114,735	-		COO64_RS18955	0.31	-0.8
114,735	-		COO64_RS18955	0.31	+0.1
114,735	-		COO64_RS18955	0.31	+0.3
114,735	-		COO64_RS18955	0.31	+0.3
114,735	-		COO64_RS18955	0.31	+0.5
114,803	+		COO64_RS18955	0.39	-0.9
114,803	+		COO64_RS18955	0.39	+0.9
114,803	+		COO64_RS18955	0.39	-0.0
114,804	-		COO64_RS18955	0.39	+0.1
114,924	-		COO64_RS18955	0.53	+0.4
114,924	-		COO64_RS18955	0.53	+0.2
114,924	-		COO64_RS18955	0.53	-0.4
115,130	+		COO64_RS18955	0.77	-0.2
115,130	+		COO64_RS18955	0.77	+1.4
115,130	+		COO64_RS18955	0.77	-0.1
115,130	+		COO64_RS18955	0.77	+0.5
115,131	-		COO64_RS18955	0.77	+0.9
115,131	-		COO64_RS18955	0.77	+0.5
115,131	-		COO64_RS18955	0.77	-0.8
115,131	-		COO64_RS18955	0.77	-0.7
115,131	-		COO64_RS18955	0.77	-0.3
115,131	-		COO64_RS18955	0.77	+0.1
115,131	-		COO64_RS18955	0.77	-1.3
115,131	-		COO64_RS18955	0.77	-0.0
115,131	-		COO64_RS18955	0.77	-0.2
115,209	+		COO64_RS18955	0.86	-0.5
115,209	+		COO64_RS18955	0.86	-0.5
115,209	+		COO64_RS18955	0.86	+1.5
115,209	+		COO64_RS18955	0.86	-0.1
115,209	+		COO64_RS18955	0.86	+0.5
115,210	-		COO64_RS18955	0.86	-0.2
115,210	-		COO64_RS18955	0.86	+0.3
115,210	-		COO64_RS18955	0.86	-1.1
115,210	-		COO64_RS18955	0.86	+0.6
115,272	+				-0.8
115,272	+				+0.7
115,361	-				+1.1