Experiment: Glycogen from bovine liver 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01386 and BACOVA_01385 overlap by 14 nucleotides BACOVA_01385 and BACOVA_01387 are separated by 150 nucleotides
BACOVA_01386: BACOVA_01386 - TonB-linked outer membrane protein, SusC/RagA family, at 47,719 to 50,976
_01386
BACOVA_01385: BACOVA_01385 - hypothetical protein, at 50,963 to 51,073
_01385
BACOVA_01387: BACOVA_01387 - transcriptional regulator, AraC family, at 51,224 to 52,072
_01387
Position (kb)
50
51
52 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 50.027 kb on + strand, within BACOVA_01386 at 50.028 kb on - strand, within BACOVA_01386 at 50.052 kb on - strand, within BACOVA_01386 at 50.057 kb on + strand, within BACOVA_01386 at 50.057 kb on + strand, within BACOVA_01386 at 50.061 kb on - strand, within BACOVA_01386 at 50.079 kb on + strand, within BACOVA_01386 at 50.080 kb on - strand, within BACOVA_01386 at 50.133 kb on - strand, within BACOVA_01386 at 50.161 kb on - strand, within BACOVA_01386 at 50.177 kb on + strand, within BACOVA_01386 at 50.190 kb on + strand, within BACOVA_01386 at 50.221 kb on - strand, within BACOVA_01386 at 50.229 kb on + strand, within BACOVA_01386 at 50.287 kb on + strand, within BACOVA_01386 at 50.305 kb on - strand, within BACOVA_01386 at 50.425 kb on + strand, within BACOVA_01386 at 50.425 kb on + strand, within BACOVA_01386 at 50.578 kb on - strand, within BACOVA_01386 at 50.585 kb on + strand, within BACOVA_01386 at 50.610 kb on - strand, within BACOVA_01386 at 50.703 kb on + strand at 50.733 kb on + strand at 50.733 kb on + strand at 50.733 kb on + strand at 50.733 kb on + strand at 50.745 kb on - strand at 50.745 kb on - strand at 50.753 kb on - strand at 50.753 kb on - strand at 50.848 kb on + strand at 51.007 kb on - strand, within BACOVA_01385 at 51.072 kb on - strand at 51.078 kb on + strand at 51.080 kb on - strand at 51.083 kb on - strand at 51.124 kb on + strand at 51.150 kb on - strand at 51.190 kb on + strand at 51.190 kb on + strand at 51.201 kb on + strand at 51.218 kb on - strand at 51.225 kb on + strand at 51.225 kb on + strand at 51.226 kb on - strand at 51.230 kb on - strand at 51.234 kb on + strand at 51.234 kb on + strand at 51.235 kb on - strand at 51.235 kb on - strand at 51.235 kb on - strand at 51.235 kb on - strand at 51.238 kb on + strand at 51.238 kb on + strand at 51.239 kb on - strand at 51.239 kb on - strand at 51.247 kb on - strand at 51.282 kb on + strand at 51.282 kb on + strand at 51.283 kb on - strand at 51.291 kb on - strand at 51.326 kb on + strand, within BACOVA_01387 at 51.326 kb on + strand, within BACOVA_01387 at 51.368 kb on + strand, within BACOVA_01387 at 51.433 kb on + strand, within BACOVA_01387 at 51.434 kb on - strand, within BACOVA_01387 at 51.444 kb on + strand, within BACOVA_01387 at 51.445 kb on - strand, within BACOVA_01387 at 51.457 kb on + strand, within BACOVA_01387 at 51.457 kb on + strand, within BACOVA_01387 at 51.499 kb on + strand, within BACOVA_01387 at 51.512 kb on + strand, within BACOVA_01387 at 51.595 kb on + strand, within BACOVA_01387 at 51.596 kb on - strand, within BACOVA_01387 at 51.600 kb on + strand, within BACOVA_01387 at 51.601 kb on - strand, within BACOVA_01387 at 51.613 kb on + strand, within BACOVA_01387 at 51.672 kb on + strand, within BACOVA_01387 at 51.673 kb on - strand, within BACOVA_01387 at 51.673 kb on - strand, within BACOVA_01387 at 51.673 kb on - strand, within BACOVA_01387 at 51.676 kb on + strand, within BACOVA_01387 at 51.676 kb on + strand, within BACOVA_01387 at 51.677 kb on - strand, within BACOVA_01387 at 51.677 kb on - strand, within BACOVA_01387 at 51.677 kb on - strand, within BACOVA_01387 at 51.733 kb on + strand, within BACOVA_01387 at 51.735 kb on + strand, within BACOVA_01387 at 51.735 kb on + strand, within BACOVA_01387 at 51.736 kb on - strand, within BACOVA_01387 at 51.900 kb on - strand, within BACOVA_01387 at 51.903 kb on - strand, within BACOVA_01387 at 51.909 kb on + strand, within BACOVA_01387 at 51.958 kb on - strand, within BACOVA_01387 at 51.995 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycogen from bovine liver 2.5 mg/mL (C) remove 50,027 + BACOVA_01386 0.71 +0.4 50,028 - BACOVA_01386 0.71 -0.9 50,052 - BACOVA_01386 0.72 +0.2 50,057 + BACOVA_01386 0.72 +0.2 50,057 + BACOVA_01386 0.72 -0.0 50,061 - BACOVA_01386 0.72 -1.0 50,079 + BACOVA_01386 0.72 -0.5 50,080 - BACOVA_01386 0.72 -0.1 50,133 - BACOVA_01386 0.74 +1.2 50,161 - BACOVA_01386 0.75 +1.3 50,177 + BACOVA_01386 0.75 +1.8 50,190 + BACOVA_01386 0.76 -1.0 50,221 - BACOVA_01386 0.77 -0.2 50,229 + BACOVA_01386 0.77 +0.8 50,287 + BACOVA_01386 0.79 -0.5 50,305 - BACOVA_01386 0.79 -0.5 50,425 + BACOVA_01386 0.83 -0.7 50,425 + BACOVA_01386 0.83 -0.1 50,578 - BACOVA_01386 0.88 +0.2 50,585 + BACOVA_01386 0.88 +0.9 50,610 - BACOVA_01386 0.89 +0.2 50,703 + -1.5 50,733 + -1.9 50,733 + +0.2 50,733 + -0.2 50,733 + +0.8 50,745 - +1.3 50,745 - -0.1 50,753 - -0.1 50,753 - +0.1 50,848 + +0.5 51,007 - BACOVA_01385 0.40 -1.2 51,072 - -1.0 51,078 + +1.6 51,080 - +0.1 51,083 - -1.2 51,124 + +0.9 51,150 - -1.4 51,190 + -0.5 51,190 + +1.0 51,201 + -0.2 51,218 - -1.6 51,225 + -0.9 51,225 + -0.6 51,226 - -0.4 51,230 - -2.3 51,234 + +1.5 51,234 + -0.5 51,235 - -1.4 51,235 - +0.3 51,235 - +1.0 51,235 - +0.5 51,238 + -0.3 51,238 + -0.5 51,239 - -1.5 51,239 - +0.3 51,247 - +0.3 51,282 + +1.0 51,282 + -0.1 51,283 - +0.8 51,291 - +0.3 51,326 + BACOVA_01387 0.12 +1.0 51,326 + BACOVA_01387 0.12 +0.8 51,368 + BACOVA_01387 0.17 -1.1 51,433 + BACOVA_01387 0.25 -1.1 51,434 - BACOVA_01387 0.25 +1.2 51,444 + BACOVA_01387 0.26 -0.1 51,445 - BACOVA_01387 0.26 -0.8 51,457 + BACOVA_01387 0.27 +1.0 51,457 + BACOVA_01387 0.27 -1.4 51,499 + BACOVA_01387 0.32 -0.2 51,512 + BACOVA_01387 0.34 +0.3 51,595 + BACOVA_01387 0.44 -0.2 51,596 - BACOVA_01387 0.44 +0.8 51,600 + BACOVA_01387 0.44 -0.0 51,601 - BACOVA_01387 0.44 -0.4 51,613 + BACOVA_01387 0.46 +0.7 51,672 + BACOVA_01387 0.53 +1.0 51,673 - BACOVA_01387 0.53 -0.2 51,673 - BACOVA_01387 0.53 +0.2 51,673 - BACOVA_01387 0.53 -0.2 51,676 + BACOVA_01387 0.53 +0.1 51,676 + BACOVA_01387 0.53 -0.8 51,677 - BACOVA_01387 0.53 +0.1 51,677 - BACOVA_01387 0.53 -1.2 51,677 - BACOVA_01387 0.53 +0.2 51,733 + BACOVA_01387 0.60 +0.3 51,735 + BACOVA_01387 0.60 +0.0 51,735 + BACOVA_01387 0.60 -1.2 51,736 - BACOVA_01387 0.60 -0.5 51,900 - BACOVA_01387 0.80 -0.1 51,903 - BACOVA_01387 0.80 -0.5 51,909 + BACOVA_01387 0.81 -0.3 51,958 - BACOVA_01387 0.86 -0.3 51,995 - +0.6
Or see this region's nucleotide sequence