Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01385

Experiment: Glycogen from bovine liver 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01386 and BACOVA_01385 overlap by 14 nucleotidesBACOVA_01385 and BACOVA_01387 are separated by 150 nucleotides BACOVA_01386: BACOVA_01386 - TonB-linked outer membrane protein, SusC/RagA family, at 47,719 to 50,976 _01386 BACOVA_01385: BACOVA_01385 - hypothetical protein, at 50,963 to 51,073 _01385 BACOVA_01387: BACOVA_01387 - transcriptional regulator, AraC family, at 51,224 to 52,072 _01387 Position (kb) 50 51 52Strain fitness (log2 ratio) -2 -1 0 1 2at 50.027 kb on + strand, within BACOVA_01386at 50.028 kb on - strand, within BACOVA_01386at 50.052 kb on - strand, within BACOVA_01386at 50.057 kb on + strand, within BACOVA_01386at 50.057 kb on + strand, within BACOVA_01386at 50.061 kb on - strand, within BACOVA_01386at 50.079 kb on + strand, within BACOVA_01386at 50.080 kb on - strand, within BACOVA_01386at 50.133 kb on - strand, within BACOVA_01386at 50.161 kb on - strand, within BACOVA_01386at 50.177 kb on + strand, within BACOVA_01386at 50.190 kb on + strand, within BACOVA_01386at 50.221 kb on - strand, within BACOVA_01386at 50.229 kb on + strand, within BACOVA_01386at 50.287 kb on + strand, within BACOVA_01386at 50.305 kb on - strand, within BACOVA_01386at 50.425 kb on + strand, within BACOVA_01386at 50.425 kb on + strand, within BACOVA_01386at 50.578 kb on - strand, within BACOVA_01386at 50.585 kb on + strand, within BACOVA_01386at 50.610 kb on - strand, within BACOVA_01386at 50.703 kb on + strandat 50.733 kb on + strandat 50.733 kb on + strandat 50.733 kb on + strandat 50.733 kb on + strandat 50.745 kb on - strandat 50.745 kb on - strandat 50.753 kb on - strandat 50.753 kb on - strandat 50.848 kb on + strandat 51.007 kb on - strand, within BACOVA_01385at 51.072 kb on - strandat 51.078 kb on + strandat 51.080 kb on - strandat 51.083 kb on - strandat 51.124 kb on + strandat 51.150 kb on - strandat 51.190 kb on + strandat 51.190 kb on + strandat 51.201 kb on + strandat 51.218 kb on - strandat 51.225 kb on + strandat 51.225 kb on + strandat 51.226 kb on - strandat 51.230 kb on - strandat 51.234 kb on + strandat 51.234 kb on + strandat 51.235 kb on - strandat 51.235 kb on - strandat 51.235 kb on - strandat 51.235 kb on - strandat 51.238 kb on + strandat 51.238 kb on + strandat 51.239 kb on - strandat 51.239 kb on - strandat 51.247 kb on - strandat 51.282 kb on + strandat 51.282 kb on + strandat 51.283 kb on - strandat 51.291 kb on - strandat 51.326 kb on + strand, within BACOVA_01387at 51.326 kb on + strand, within BACOVA_01387at 51.368 kb on + strand, within BACOVA_01387at 51.433 kb on + strand, within BACOVA_01387at 51.434 kb on - strand, within BACOVA_01387at 51.444 kb on + strand, within BACOVA_01387at 51.445 kb on - strand, within BACOVA_01387at 51.457 kb on + strand, within BACOVA_01387at 51.457 kb on + strand, within BACOVA_01387at 51.499 kb on + strand, within BACOVA_01387at 51.512 kb on + strand, within BACOVA_01387at 51.595 kb on + strand, within BACOVA_01387at 51.596 kb on - strand, within BACOVA_01387at 51.600 kb on + strand, within BACOVA_01387at 51.601 kb on - strand, within BACOVA_01387at 51.613 kb on + strand, within BACOVA_01387at 51.672 kb on + strand, within BACOVA_01387at 51.673 kb on - strand, within BACOVA_01387at 51.673 kb on - strand, within BACOVA_01387at 51.673 kb on - strand, within BACOVA_01387at 51.676 kb on + strand, within BACOVA_01387at 51.676 kb on + strand, within BACOVA_01387at 51.677 kb on - strand, within BACOVA_01387at 51.677 kb on - strand, within BACOVA_01387at 51.677 kb on - strand, within BACOVA_01387at 51.733 kb on + strand, within BACOVA_01387at 51.735 kb on + strand, within BACOVA_01387at 51.735 kb on + strand, within BACOVA_01387at 51.736 kb on - strand, within BACOVA_01387at 51.900 kb on - strand, within BACOVA_01387at 51.903 kb on - strand, within BACOVA_01387at 51.909 kb on + strand, within BACOVA_01387at 51.958 kb on - strand, within BACOVA_01387at 51.995 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycogen from bovine liver 2.5 mg/mL (C)
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50,027 + BACOVA_01386 0.71 +0.4
50,028 - BACOVA_01386 0.71 -0.9
50,052 - BACOVA_01386 0.72 +0.2
50,057 + BACOVA_01386 0.72 +0.2
50,057 + BACOVA_01386 0.72 -0.0
50,061 - BACOVA_01386 0.72 -1.0
50,079 + BACOVA_01386 0.72 -0.5
50,080 - BACOVA_01386 0.72 -0.1
50,133 - BACOVA_01386 0.74 +1.2
50,161 - BACOVA_01386 0.75 +1.3
50,177 + BACOVA_01386 0.75 +1.8
50,190 + BACOVA_01386 0.76 -1.0
50,221 - BACOVA_01386 0.77 -0.2
50,229 + BACOVA_01386 0.77 +0.8
50,287 + BACOVA_01386 0.79 -0.5
50,305 - BACOVA_01386 0.79 -0.5
50,425 + BACOVA_01386 0.83 -0.7
50,425 + BACOVA_01386 0.83 -0.1
50,578 - BACOVA_01386 0.88 +0.2
50,585 + BACOVA_01386 0.88 +0.9
50,610 - BACOVA_01386 0.89 +0.2
50,703 + -1.5
50,733 + -1.9
50,733 + +0.2
50,733 + -0.2
50,733 + +0.8
50,745 - +1.3
50,745 - -0.1
50,753 - -0.1
50,753 - +0.1
50,848 + +0.5
51,007 - BACOVA_01385 0.40 -1.2
51,072 - -1.0
51,078 + +1.6
51,080 - +0.1
51,083 - -1.2
51,124 + +0.9
51,150 - -1.4
51,190 + -0.5
51,190 + +1.0
51,201 + -0.2
51,218 - -1.6
51,225 + -0.9
51,225 + -0.6
51,226 - -0.4
51,230 - -2.3
51,234 + +1.5
51,234 + -0.5
51,235 - -1.4
51,235 - +0.3
51,235 - +1.0
51,235 - +0.5
51,238 + -0.3
51,238 + -0.5
51,239 - -1.5
51,239 - +0.3
51,247 - +0.3
51,282 + +1.0
51,282 + -0.1
51,283 - +0.8
51,291 - +0.3
51,326 + BACOVA_01387 0.12 +1.0
51,326 + BACOVA_01387 0.12 +0.8
51,368 + BACOVA_01387 0.17 -1.1
51,433 + BACOVA_01387 0.25 -1.1
51,434 - BACOVA_01387 0.25 +1.2
51,444 + BACOVA_01387 0.26 -0.1
51,445 - BACOVA_01387 0.26 -0.8
51,457 + BACOVA_01387 0.27 +1.0
51,457 + BACOVA_01387 0.27 -1.4
51,499 + BACOVA_01387 0.32 -0.2
51,512 + BACOVA_01387 0.34 +0.3
51,595 + BACOVA_01387 0.44 -0.2
51,596 - BACOVA_01387 0.44 +0.8
51,600 + BACOVA_01387 0.44 -0.0
51,601 - BACOVA_01387 0.44 -0.4
51,613 + BACOVA_01387 0.46 +0.7
51,672 + BACOVA_01387 0.53 +1.0
51,673 - BACOVA_01387 0.53 -0.2
51,673 - BACOVA_01387 0.53 +0.2
51,673 - BACOVA_01387 0.53 -0.2
51,676 + BACOVA_01387 0.53 +0.1
51,676 + BACOVA_01387 0.53 -0.8
51,677 - BACOVA_01387 0.53 +0.1
51,677 - BACOVA_01387 0.53 -1.2
51,677 - BACOVA_01387 0.53 +0.2
51,733 + BACOVA_01387 0.60 +0.3
51,735 + BACOVA_01387 0.60 +0.0
51,735 + BACOVA_01387 0.60 -1.2
51,736 - BACOVA_01387 0.60 -0.5
51,900 - BACOVA_01387 0.80 -0.1
51,903 - BACOVA_01387 0.80 -0.5
51,909 + BACOVA_01387 0.81 -0.3
51,958 - BACOVA_01387 0.86 -0.3
51,995 - +0.6

Or see this region's nucleotide sequence