Strain Fitness in Escherichia coli ECRC102 around NIAGMN_26860

Experiment: Bas14

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntyciG and yciF are separated by 85 nucleotidesyciF and yciE are separated by 45 nucleotides NIAGMN_26850: yciG - Uncharacterized protein YciG, at 5,229,456 to 5,229,635 yciG NIAGMN_26855: yciF - Protein YciF, at 5,229,721 to 5,230,221 yciF NIAGMN_26860: yciE - Protein YciE, at 5,230,267 to 5,230,773 yciE Position (kb) 5230 5231Strain fitness (log2 ratio) -1 0 1at 5231.344 kb on + strandat 5231.520 kb on - strandat 5231.559 kb on - strandat 5231.559 kb on - strandat 5231.673 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas14
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5,231,344 + -0.5
5,231,520 - +1.3
5,231,559 - +0.0
5,231,559 - +1.4
5,231,673 + +1.0

Or see this region's nucleotide sequence