Strain Fitness in Escherichia coli ECRC102 around NIAGMN_16495

Experiment: Bas14

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntygiF and glnE are separated by 22 nucleotidesglnE and hldE are separated by 47 nucleotides NIAGMN_16490: ygiF - inorganic triphosphatase, at 3,261,236 to 3,262,537 ygiF NIAGMN_16495: glnE - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 3,262,560 to 3,265,400 glnE NIAGMN_16500: hldE - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 3,265,448 to 3,266,881 hldE Position (kb) 3262 3263 3264 3265 3266Strain fitness (log2 ratio) -2 -1 0 1 2at 3261.582 kb on + strand, within ygiFat 3261.583 kb on - strand, within ygiFat 3261.609 kb on - strand, within ygiFat 3261.700 kb on + strand, within ygiFat 3261.700 kb on + strand, within ygiFat 3261.700 kb on + strand, within ygiFat 3261.701 kb on - strand, within ygiFat 3261.771 kb on + strand, within ygiFat 3262.009 kb on + strand, within ygiFat 3262.009 kb on + strand, within ygiFat 3262.024 kb on + strand, within ygiFat 3262.025 kb on - strand, within ygiFat 3262.025 kb on - strand, within ygiFat 3262.025 kb on - strand, within ygiFat 3262.045 kb on + strand, within ygiFat 3262.075 kb on - strand, within ygiFat 3262.139 kb on + strand, within ygiFat 3262.188 kb on + strand, within ygiFat 3262.189 kb on - strand, within ygiFat 3262.361 kb on - strand, within ygiFat 3262.371 kb on + strand, within ygiFat 3262.371 kb on + strand, within ygiFat 3262.388 kb on + strand, within ygiFat 3262.391 kb on + strand, within ygiFat 3262.391 kb on + strand, within ygiFat 3262.391 kb on + strand, within ygiFat 3262.391 kb on + strand, within ygiFat 3262.391 kb on + strand, within ygiFat 3262.392 kb on - strand, within ygiFat 3262.392 kb on - strand, within ygiFat 3262.392 kb on - strand, within ygiFat 3262.392 kb on - strand, within ygiFat 3262.392 kb on - strand, within ygiFat 3262.392 kb on - strand, within ygiFat 3262.392 kb on - strand, within ygiFat 3262.447 kb on + strandat 3262.448 kb on - strandat 3262.549 kb on + strandat 3262.582 kb on + strandat 3262.591 kb on - strandat 3262.643 kb on + strandat 3262.696 kb on + strandat 3262.697 kb on - strandat 3262.697 kb on - strandat 3262.697 kb on - strandat 3262.697 kb on - strandat 3262.764 kb on + strandat 3262.764 kb on + strandat 3262.764 kb on + strandat 3262.764 kb on + strandat 3262.764 kb on + strandat 3262.764 kb on + strandat 3262.764 kb on + strandat 3262.764 kb on + strandat 3262.765 kb on - strandat 3262.765 kb on - strandat 3262.765 kb on - strandat 3262.817 kb on - strandat 3262.855 kb on + strand, within glnEat 3262.856 kb on - strand, within glnEat 3262.856 kb on - strand, within glnEat 3262.856 kb on - strand, within glnEat 3262.856 kb on - strand, within glnEat 3262.859 kb on + strand, within glnEat 3262.903 kb on + strand, within glnEat 3262.903 kb on + strand, within glnEat 3262.903 kb on + strand, within glnEat 3262.903 kb on + strand, within glnEat 3262.904 kb on - strand, within glnEat 3262.960 kb on + strand, within glnEat 3262.961 kb on - strand, within glnEat 3262.962 kb on + strand, within glnEat 3262.963 kb on - strand, within glnEat 3262.963 kb on - strand, within glnEat 3262.963 kb on - strand, within glnEat 3262.963 kb on - strand, within glnEat 3262.963 kb on - strand, within glnEat 3263.042 kb on + strand, within glnEat 3263.114 kb on + strand, within glnEat 3263.115 kb on - strand, within glnEat 3263.115 kb on - strand, within glnEat 3263.115 kb on - strand, within glnEat 3263.181 kb on - strand, within glnEat 3263.217 kb on + strand, within glnEat 3263.292 kb on + strand, within glnEat 3263.370 kb on + strand, within glnEat 3263.371 kb on - strand, within glnEat 3263.371 kb on - strand, within glnEat 3263.371 kb on - strand, within glnEat 3263.418 kb on + strand, within glnEat 3263.419 kb on - strand, within glnEat 3263.419 kb on - strand, within glnEat 3263.504 kb on + strand, within glnEat 3263.505 kb on - strand, within glnEat 3263.605 kb on + strand, within glnEat 3263.679 kb on + strand, within glnEat 3263.680 kb on - strand, within glnEat 3263.680 kb on - strand, within glnEat 3263.680 kb on - strand, within glnEat 3263.680 kb on - strand, within glnEat 3263.680 kb on - strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.831 kb on + strand, within glnEat 3263.832 kb on - strand, within glnEat 3263.954 kb on + strand, within glnEat 3263.954 kb on + strand, within glnEat 3263.954 kb on + strand, within glnEat 3263.954 kb on + strand, within glnEat 3263.954 kb on + strand, within glnEat 3263.954 kb on + strand, within glnEat 3263.954 kb on + strand, within glnEat 3263.955 kb on - strand, within glnEat 3263.955 kb on - strand, within glnEat 3264.128 kb on + strand, within glnEat 3264.144 kb on - strand, within glnEat 3264.181 kb on - strand, within glnEat 3264.181 kb on - strand, within glnEat 3264.181 kb on - strand, within glnEat 3264.339 kb on + strand, within glnEat 3264.360 kb on + strand, within glnEat 3264.361 kb on - strand, within glnEat 3264.496 kb on + strand, within glnEat 3264.496 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.520 kb on + strand, within glnEat 3264.570 kb on - strand, within glnEat 3264.646 kb on + strand, within glnEat 3264.647 kb on - strand, within glnEat 3264.651 kb on + strand, within glnEat 3264.651 kb on + strand, within glnEat 3264.652 kb on - strand, within glnEat 3264.652 kb on - strand, within glnEat 3264.741 kb on + strand, within glnEat 3264.764 kb on + strand, within glnEat 3264.764 kb on + strand, within glnEat 3264.764 kb on + strand, within glnEat 3264.764 kb on + strand, within glnEat 3264.764 kb on + strand, within glnEat 3264.764 kb on + strand, within glnEat 3264.854 kb on + strand, within glnEat 3264.855 kb on - strand, within glnEat 3264.934 kb on + strand, within glnEat 3264.934 kb on + strand, within glnEat 3264.934 kb on + strand, within glnEat 3264.934 kb on + strand, within glnEat 3264.935 kb on - strand, within glnEat 3264.935 kb on - strand, within glnEat 3264.935 kb on - strand, within glnEat 3264.939 kb on + strand, within glnEat 3264.989 kb on + strand, within glnEat 3264.990 kb on - strand, within glnEat 3264.990 kb on - strand, within glnEat 3265.115 kb on + strand, within glnEat 3265.116 kb on - strand, within glnEat 3265.116 kb on - strand, within glnEat 3265.130 kb on + strandat 3265.130 kb on + strandat 3265.131 kb on - strandat 3265.177 kb on + strandat 3265.213 kb on + strandat 3265.213 kb on + strandat 3265.269 kb on + strandat 3265.269 kb on + strandat 3265.269 kb on + strandat 3265.269 kb on + strandat 3265.269 kb on + strandat 3265.269 kb on + strandat 3265.270 kb on - strandat 3265.270 kb on - strandat 3265.270 kb on - strandat 3265.270 kb on - strandat 3265.270 kb on - strandat 3265.270 kb on - strandat 3265.270 kb on - strandat 3265.270 kb on - strandat 3265.274 kb on + strandat 3265.403 kb on + strandat 3265.403 kb on + strandat 3265.403 kb on + strandat 3265.403 kb on + strandat 3265.403 kb on + strandat 3265.403 kb on + strandat 3265.404 kb on - strandat 3265.404 kb on - strandat 3265.404 kb on - strandat 3265.408 kb on + strandat 3265.408 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas14
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3,261,582 + ygiF NIAGMN_16490 0.27 +1.0
3,261,583 - ygiF NIAGMN_16490 0.27 -0.7
3,261,609 - ygiF NIAGMN_16490 0.29 -0.0
3,261,700 + ygiF NIAGMN_16490 0.36 -0.9
3,261,700 + ygiF NIAGMN_16490 0.36 +0.1
3,261,700 + ygiF NIAGMN_16490 0.36 -0.4
3,261,701 - ygiF NIAGMN_16490 0.36 -0.4
3,261,771 + ygiF NIAGMN_16490 0.41 -0.8
3,262,009 + ygiF NIAGMN_16490 0.59 -0.2
3,262,009 + ygiF NIAGMN_16490 0.59 +2.1
3,262,024 + ygiF NIAGMN_16490 0.61 -0.6
3,262,025 - ygiF NIAGMN_16490 0.61 +1.6
3,262,025 - ygiF NIAGMN_16490 0.61 +0.0
3,262,025 - ygiF NIAGMN_16490 0.61 +0.7
3,262,045 + ygiF NIAGMN_16490 0.62 -1.3
3,262,075 - ygiF NIAGMN_16490 0.64 +1.9
3,262,139 + ygiF NIAGMN_16490 0.69 -0.3
3,262,188 + ygiF NIAGMN_16490 0.73 +1.6
3,262,189 - ygiF NIAGMN_16490 0.73 +0.3
3,262,361 - ygiF NIAGMN_16490 0.86 +0.4
3,262,371 + ygiF NIAGMN_16490 0.87 -0.3
3,262,371 + ygiF NIAGMN_16490 0.87 -0.9
3,262,388 + ygiF NIAGMN_16490 0.88 +0.4
3,262,391 + ygiF NIAGMN_16490 0.89 -1.0
3,262,391 + ygiF NIAGMN_16490 0.89 +0.4
3,262,391 + ygiF NIAGMN_16490 0.89 -0.3
3,262,391 + ygiF NIAGMN_16490 0.89 +1.2
3,262,391 + ygiF NIAGMN_16490 0.89 -0.0
3,262,392 - ygiF NIAGMN_16490 0.89 -1.0
3,262,392 - ygiF NIAGMN_16490 0.89 +0.6
3,262,392 - ygiF NIAGMN_16490 0.89 -1.3
3,262,392 - ygiF NIAGMN_16490 0.89 +1.0
3,262,392 - ygiF NIAGMN_16490 0.89 -2.0
3,262,392 - ygiF NIAGMN_16490 0.89 +1.3
3,262,392 - ygiF NIAGMN_16490 0.89 +1.7
3,262,447 + -0.6
3,262,448 - -0.4
3,262,549 + -1.6
3,262,582 + +0.4
3,262,591 - +1.4
3,262,643 + -0.2
3,262,696 + +1.4
3,262,697 - +0.3
3,262,697 - +1.0
3,262,697 - +0.7
3,262,697 - -0.4
3,262,764 + +1.1
3,262,764 + -0.0
3,262,764 + -1.3
3,262,764 + -0.2
3,262,764 + -0.7
3,262,764 + -0.0
3,262,764 + +0.0
3,262,764 + -0.3
3,262,765 - -1.3
3,262,765 - -2.7
3,262,765 - +0.0
3,262,817 - +0.4
3,262,855 + glnE NIAGMN_16495 0.10 +2.2
3,262,856 - glnE NIAGMN_16495 0.10 +0.4
3,262,856 - glnE NIAGMN_16495 0.10 +0.1
3,262,856 - glnE NIAGMN_16495 0.10 -0.4
3,262,856 - glnE NIAGMN_16495 0.10 +0.7
3,262,859 + glnE NIAGMN_16495 0.11 -0.9
3,262,903 + glnE NIAGMN_16495 0.12 -1.7
3,262,903 + glnE NIAGMN_16495 0.12 +0.1
3,262,903 + glnE NIAGMN_16495 0.12 -0.6
3,262,903 + glnE NIAGMN_16495 0.12 +0.5
3,262,904 - glnE NIAGMN_16495 0.12 -1.1
3,262,960 + glnE NIAGMN_16495 0.14 +1.7
3,262,961 - glnE NIAGMN_16495 0.14 +0.5
3,262,962 + glnE NIAGMN_16495 0.14 -0.8
3,262,963 - glnE NIAGMN_16495 0.14 -0.6
3,262,963 - glnE NIAGMN_16495 0.14 +1.3
3,262,963 - glnE NIAGMN_16495 0.14 +0.3
3,262,963 - glnE NIAGMN_16495 0.14 +0.0
3,262,963 - glnE NIAGMN_16495 0.14 +0.0
3,263,042 + glnE NIAGMN_16495 0.17 -0.1
3,263,114 + glnE NIAGMN_16495 0.20 -0.2
3,263,115 - glnE NIAGMN_16495 0.20 -0.4
3,263,115 - glnE NIAGMN_16495 0.20 -0.7
3,263,115 - glnE NIAGMN_16495 0.20 +0.7
3,263,181 - glnE NIAGMN_16495 0.22 +2.0
3,263,217 + glnE NIAGMN_16495 0.23 +0.4
3,263,292 + glnE NIAGMN_16495 0.26 +0.1
3,263,370 + glnE NIAGMN_16495 0.29 -0.8
3,263,371 - glnE NIAGMN_16495 0.29 -0.4
3,263,371 - glnE NIAGMN_16495 0.29 -2.2
3,263,371 - glnE NIAGMN_16495 0.29 -1.1
3,263,418 + glnE NIAGMN_16495 0.30 -0.3
3,263,419 - glnE NIAGMN_16495 0.30 +1.3
3,263,419 - glnE NIAGMN_16495 0.30 +0.3
3,263,504 + glnE NIAGMN_16495 0.33 +0.4
3,263,505 - glnE NIAGMN_16495 0.33 +0.8
3,263,605 + glnE NIAGMN_16495 0.37 -0.6
3,263,679 + glnE NIAGMN_16495 0.39 +1.3
3,263,680 - glnE NIAGMN_16495 0.39 +0.7
3,263,680 - glnE NIAGMN_16495 0.39 -0.8
3,263,680 - glnE NIAGMN_16495 0.39 -0.3
3,263,680 - glnE NIAGMN_16495 0.39 -0.8
3,263,680 - glnE NIAGMN_16495 0.39 +0.6
3,263,831 + glnE NIAGMN_16495 0.45 -0.6
3,263,831 + glnE NIAGMN_16495 0.45 +1.4
3,263,831 + glnE NIAGMN_16495 0.45 -1.6
3,263,831 + glnE NIAGMN_16495 0.45 +1.2
3,263,831 + glnE NIAGMN_16495 0.45 -0.4
3,263,831 + glnE NIAGMN_16495 0.45 -0.4
3,263,831 + glnE NIAGMN_16495 0.45 -1.3
3,263,831 + glnE NIAGMN_16495 0.45 +0.0
3,263,831 + glnE NIAGMN_16495 0.45 +1.2
3,263,832 - glnE NIAGMN_16495 0.45 +1.5
3,263,954 + glnE NIAGMN_16495 0.49 -0.9
3,263,954 + glnE NIAGMN_16495 0.49 -0.1
3,263,954 + glnE NIAGMN_16495 0.49 +0.2
3,263,954 + glnE NIAGMN_16495 0.49 -0.2
3,263,954 + glnE NIAGMN_16495 0.49 +0.2
3,263,954 + glnE NIAGMN_16495 0.49 +0.0
3,263,954 + glnE NIAGMN_16495 0.49 -0.7
3,263,955 - glnE NIAGMN_16495 0.49 +0.4
3,263,955 - glnE NIAGMN_16495 0.49 -2.3
3,264,128 + glnE NIAGMN_16495 0.55 +0.5
3,264,144 - glnE NIAGMN_16495 0.56 +0.1
3,264,181 - glnE NIAGMN_16495 0.57 -1.0
3,264,181 - glnE NIAGMN_16495 0.57 -2.4
3,264,181 - glnE NIAGMN_16495 0.57 +0.4
3,264,339 + glnE NIAGMN_16495 0.63 -0.3
3,264,360 + glnE NIAGMN_16495 0.63 -0.3
3,264,361 - glnE NIAGMN_16495 0.63 -0.6
3,264,496 + glnE NIAGMN_16495 0.68 +0.6
3,264,496 + glnE NIAGMN_16495 0.68 +0.0
3,264,520 + glnE NIAGMN_16495 0.69 +2.0
3,264,520 + glnE NIAGMN_16495 0.69 +0.6
3,264,520 + glnE NIAGMN_16495 0.69 -0.2
3,264,520 + glnE NIAGMN_16495 0.69 +0.1
3,264,520 + glnE NIAGMN_16495 0.69 -1.0
3,264,520 + glnE NIAGMN_16495 0.69 -0.3
3,264,520 + glnE NIAGMN_16495 0.69 -0.7
3,264,520 + glnE NIAGMN_16495 0.69 +0.3
3,264,520 + glnE NIAGMN_16495 0.69 +0.4
3,264,520 + glnE NIAGMN_16495 0.69 -1.0
3,264,570 - glnE NIAGMN_16495 0.71 -1.4
3,264,646 + glnE NIAGMN_16495 0.73 -1.7
3,264,647 - glnE NIAGMN_16495 0.73 +1.0
3,264,651 + glnE NIAGMN_16495 0.74 -2.3
3,264,651 + glnE NIAGMN_16495 0.74 +0.3
3,264,652 - glnE NIAGMN_16495 0.74 +0.4
3,264,652 - glnE NIAGMN_16495 0.74 -1.7
3,264,741 + glnE NIAGMN_16495 0.77 -1.1
3,264,764 + glnE NIAGMN_16495 0.78 -0.9
3,264,764 + glnE NIAGMN_16495 0.78 +0.2
3,264,764 + glnE NIAGMN_16495 0.78 -1.0
3,264,764 + glnE NIAGMN_16495 0.78 -0.2
3,264,764 + glnE NIAGMN_16495 0.78 +0.8
3,264,764 + glnE NIAGMN_16495 0.78 +0.3
3,264,854 + glnE NIAGMN_16495 0.81 +0.0
3,264,855 - glnE NIAGMN_16495 0.81 -0.6
3,264,934 + glnE NIAGMN_16495 0.84 +0.2
3,264,934 + glnE NIAGMN_16495 0.84 +0.0
3,264,934 + glnE NIAGMN_16495 0.84 -1.2
3,264,934 + glnE NIAGMN_16495 0.84 +0.4
3,264,935 - glnE NIAGMN_16495 0.84 +0.1
3,264,935 - glnE NIAGMN_16495 0.84 -0.7
3,264,935 - glnE NIAGMN_16495 0.84 -0.6
3,264,939 + glnE NIAGMN_16495 0.84 -0.9
3,264,989 + glnE NIAGMN_16495 0.85 +1.3
3,264,990 - glnE NIAGMN_16495 0.86 -1.4
3,264,990 - glnE NIAGMN_16495 0.86 +0.7
3,265,115 + glnE NIAGMN_16495 0.90 -0.2
3,265,116 - glnE NIAGMN_16495 0.90 -1.1
3,265,116 - glnE NIAGMN_16495 0.90 +0.7
3,265,130 + +0.1
3,265,130 + +0.7
3,265,131 - -1.7
3,265,177 + -0.3
3,265,213 + -0.0
3,265,213 + +2.0
3,265,269 + +0.9
3,265,269 + -0.9
3,265,269 + -1.9
3,265,269 + -0.2
3,265,269 + +0.6
3,265,269 + -1.2
3,265,270 - -0.1
3,265,270 - +0.4
3,265,270 - -1.0
3,265,270 - +0.4
3,265,270 - -1.3
3,265,270 - -0.7
3,265,270 - +0.3
3,265,270 - -0.8
3,265,274 + -1.2
3,265,403 + -0.2
3,265,403 + -0.5
3,265,403 + +0.8
3,265,403 + -0.5
3,265,403 + -0.8
3,265,403 + -0.6
3,265,404 - +0.4
3,265,404 - -0.3
3,265,404 - -0.6
3,265,408 + -1.4
3,265,408 + -1.4

Or see this region's nucleotide sequence