Strain Fitness in Escherichia coli ECRC102 around NIAGMN_10330

Experiment: Bas14

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas14
2,030,426	-	dtpC	NIAGMN_10325	0.55	+0.7
2,030,426	-	dtpC	NIAGMN_10325	0.55	+0.1
2,030,528	+	dtpC	NIAGMN_10325	0.62	+1.5
2,030,529	-	dtpC	NIAGMN_10325	0.62	+0.4
2,030,529	-	dtpC	NIAGMN_10325	0.62	-0.7
2,030,536	+	dtpC	NIAGMN_10325	0.63	+0.8
2,030,536	+	dtpC	NIAGMN_10325	0.63	-0.2
2,030,536	+	dtpC	NIAGMN_10325	0.63	+1.2
2,030,536	+	dtpC	NIAGMN_10325	0.63	-0.3
2,030,536	+	dtpC	NIAGMN_10325	0.63	+0.3
2,030,537	-	dtpC	NIAGMN_10325	0.63	-1.5
2,030,540	+	dtpC	NIAGMN_10325	0.63	+1.0
2,030,540	+	dtpC	NIAGMN_10325	0.63	-1.5
2,030,540	+	dtpC	NIAGMN_10325	0.63	-0.0
2,030,541	-	dtpC	NIAGMN_10325	0.63	+0.4
2,030,541	-	dtpC	NIAGMN_10325	0.63	-0.2
2,030,548	+	dtpC	NIAGMN_10325	0.63	-0.4
2,030,548	+	dtpC	NIAGMN_10325	0.63	+0.0
2,030,548	+	dtpC	NIAGMN_10325	0.63	-0.7
2,030,669	-	dtpC	NIAGMN_10325	0.72	+0.9
2,030,690	+	dtpC	NIAGMN_10325	0.73	+1.1
2,030,691	-	dtpC	NIAGMN_10325	0.73	+1.0
2,030,691	-	dtpC	NIAGMN_10325	0.73	-0.3
2,030,691	-	dtpC	NIAGMN_10325	0.73	+0.6
2,030,691	-	dtpC	NIAGMN_10325	0.73	+3.0
2,030,691	-	dtpC	NIAGMN_10325	0.73	-1.4
2,030,792	+	dtpC	NIAGMN_10325	0.80	-0.3
2,030,792	+	dtpC	NIAGMN_10325	0.80	+1.0
2,030,857	-	dtpC	NIAGMN_10325	0.85	+0.0
2,030,857	-	dtpC	NIAGMN_10325	0.85	+0.4
2,030,857	-	dtpC	NIAGMN_10325	0.85	+0.1
2,030,857	-	dtpC	NIAGMN_10325	0.85	-0.4
2,030,857	-	dtpC	NIAGMN_10325	0.85	+0.6
2,030,858	+	dtpC	NIAGMN_10325	0.85	+0.3
2,030,858	+	dtpC	NIAGMN_10325	0.85	-0.7
2,030,858	+	dtpC	NIAGMN_10325	0.85	+1.0
2,030,858	+	dtpC	NIAGMN_10325	0.85	+0.1
2,030,859	-	dtpC	NIAGMN_10325	0.85	+0.4
2,030,859	-	dtpC	NIAGMN_10325	0.85	-1.9
2,030,952	+				-0.7
2,031,014	-				+0.5
2,031,146	+				-0.2
2,031,158	+				+0.4
2,031,179	+				-0.2
2,031,179	+				+0.7
2,031,179	+				+1.0
2,031,188	+				-1.0
2,031,208	+				-0.5
2,031,223	-				+1.0
2,031,223	-				+2.6
2,031,223	-				+0.2
2,031,232	+				-0.4
2,031,232	+				+0.4
2,031,232	+				-0.2
2,031,233	-				+0.4
2,031,235	+				+0.4
2,031,236	-				+1.6
2,031,251	+				-1.6
2,031,252	-				-1.1
2,031,252	-				+2.6
2,031,254	+				+1.4
2,031,254	+				+0.1
2,031,254	+				-0.2
2,031,254	+				+1.9
2,031,254	+				+1.7
2,031,254	+				+0.1
2,031,255	-				+2.3
2,031,255	-				+0.3
2,031,261	+				+0.7
2,031,277	+				-1.2
2,031,281	+				-0.4
2,031,281	+				-0.2
2,031,281	+				-2.3
2,031,286	+				-0.7
2,031,286	+				+0.4
2,031,287	-				-0.4
2,031,287	-				-0.6
2,031,402	+				+0.2
2,031,402	+				-0.9
2,031,403	-				+1.0
2,031,403	-				-0.6
2,031,448	+				+0.7
2,031,449	-				-0.1
2,031,507	+	lysS	NIAGMN_10330	0.13	+0.9
2,031,550	+	lysS	NIAGMN_10330	0.15	+0.8
2,031,551	-	lysS	NIAGMN_10330	0.15	+1.0
2,031,551	-	lysS	NIAGMN_10330	0.15	+2.6
2,031,574	-	lysS	NIAGMN_10330	0.17	-0.2
2,031,574	-	lysS	NIAGMN_10330	0.17	-0.5
2,031,608	+	lysS	NIAGMN_10330	0.19	+0.2
2,031,608	+	lysS	NIAGMN_10330	0.19	+0.6
2,031,609	-	lysS	NIAGMN_10330	0.19	-1.1
2,031,609	-	lysS	NIAGMN_10330	0.19	+0.4
2,031,609	-	lysS	NIAGMN_10330	0.19	+1.1
2,031,609	-	lysS	NIAGMN_10330	0.19	+0.4
2,031,622	+	lysS	NIAGMN_10330	0.20	-0.2
2,031,623	-	lysS	NIAGMN_10330	0.20	+0.7
2,031,641	+	lysS	NIAGMN_10330	0.21	-0.2
2,031,641	+	lysS	NIAGMN_10330	0.21	-2.6
2,031,642	-	lysS	NIAGMN_10330	0.21	-1.9
2,031,642	-	lysS	NIAGMN_10330	0.21	+0.4
2,031,643	+	lysS	NIAGMN_10330	0.21	+0.4
2,031,644	-	lysS	NIAGMN_10330	0.22	+1.9
2,031,695	-	lysS	NIAGMN_10330	0.25	-0.3
2,031,736	+	lysS	NIAGMN_10330	0.28	-1.1
2,031,737	-	lysS	NIAGMN_10330	0.28	-0.0
2,031,775	-	lysS	NIAGMN_10330	0.30	-0.8
2,031,775	-	lysS	NIAGMN_10330	0.30	-1.1
2,031,782	-	lysS	NIAGMN_10330	0.31	+1.2
2,031,827	+	lysS	NIAGMN_10330	0.34	+0.1
2,031,850	+	lysS	NIAGMN_10330	0.35	+0.6
2,031,850	+	lysS	NIAGMN_10330	0.35	+1.0
2,031,851	-	lysS	NIAGMN_10330	0.35	-0.3
2,031,851	-	lysS	NIAGMN_10330	0.35	+0.4
2,031,933	+	lysS	NIAGMN_10330	0.41	+0.0
2,031,934	-	lysS	NIAGMN_10330	0.41	+0.1
2,031,955	-	lysS	NIAGMN_10330	0.42	-0.9
2,031,955	-	lysS	NIAGMN_10330	0.42	-1.1
2,031,997	+	lysS	NIAGMN_10330	0.45	-0.3
2,031,997	+	lysS	NIAGMN_10330	0.45	-0.8
2,031,997	+	lysS	NIAGMN_10330	0.45	+0.1
2,031,998	-	lysS	NIAGMN_10330	0.45	-0.3
2,031,998	-	lysS	NIAGMN_10330	0.45	+0.7
2,032,012	-	lysS	NIAGMN_10330	0.46	+0.8
2,032,015	+	lysS	NIAGMN_10330	0.46	-0.0
2,032,015	+	lysS	NIAGMN_10330	0.46	+0.7
2,032,015	+	lysS	NIAGMN_10330	0.46	-0.6
2,032,015	+	lysS	NIAGMN_10330	0.46	+0.8
2,032,015	+	lysS	NIAGMN_10330	0.46	-1.2
2,032,015	+	lysS	NIAGMN_10330	0.46	-0.5
2,032,016	-	lysS	NIAGMN_10330	0.46	-0.9
2,032,016	-	lysS	NIAGMN_10330	0.46	+0.0
2,032,016	-	lysS	NIAGMN_10330	0.46	-0.6
2,032,016	-	lysS	NIAGMN_10330	0.46	-1.6
2,032,016	-	lysS	NIAGMN_10330	0.46	-1.6
2,032,016	-	lysS	NIAGMN_10330	0.46	-2.1
2,032,016	-	lysS	NIAGMN_10330	0.46	+1.5
2,032,016	-	lysS	NIAGMN_10330	0.46	+1.3
2,032,019	+	lysS	NIAGMN_10330	0.46	+2.0
2,032,019	+	lysS	NIAGMN_10330	0.46	+0.8
2,032,019	+	lysS	NIAGMN_10330	0.46	-0.6
2,032,019	+	lysS	NIAGMN_10330	0.46	+0.7
2,032,019	+	lysS	NIAGMN_10330	0.46	+0.5
2,032,019	+	lysS	NIAGMN_10330	0.46	+0.8
2,032,019	+	lysS	NIAGMN_10330	0.46	+0.2
2,032,019	+	lysS	NIAGMN_10330	0.46	-2.4
2,032,020	-	lysS	NIAGMN_10330	0.46	-0.6
2,032,020	-	lysS	NIAGMN_10330	0.46	+3.6
2,032,020	-	lysS	NIAGMN_10330	0.46	-0.8
2,032,020	-	lysS	NIAGMN_10330	0.46	+0.0
2,032,020	-	lysS	NIAGMN_10330	0.46	+0.3
2,032,020	-	lysS	NIAGMN_10330	0.46	+0.7
2,032,020	-	lysS	NIAGMN_10330	0.46	+1.2
2,032,020	-	lysS	NIAGMN_10330	0.46	+0.2
2,032,020	-	lysS	NIAGMN_10330	0.46	-0.8
2,032,020	-	lysS	NIAGMN_10330	0.46	-0.5
2,032,020	-	lysS	NIAGMN_10330	0.46	+3.0
2,032,027	+	lysS	NIAGMN_10330	0.47	+0.4
2,032,044	-	lysS	NIAGMN_10330	0.48	+1.0
2,032,062	+	lysS	NIAGMN_10330	0.49	-1.1
2,032,096	+	lysS	NIAGMN_10330	0.51	+0.0
2,032,114	+	lysS	NIAGMN_10330	0.53	+0.2
2,032,157	+	lysS	NIAGMN_10330	0.55	+1.0
2,032,158	-	lysS	NIAGMN_10330	0.55	+0.6
2,032,244	-	lysS	NIAGMN_10330	0.61	-0.3
2,032,244	-	lysS	NIAGMN_10330	0.61	+0.7
2,032,253	+	lysS	NIAGMN_10330	0.62	-0.2
2,032,253	+	lysS	NIAGMN_10330	0.62	-1.9
2,032,253	+	lysS	NIAGMN_10330	0.62	-0.7
2,032,323	-	lysS	NIAGMN_10330	0.66	-0.7
2,032,377	+	lysS	NIAGMN_10330	0.70	-0.9
2,032,377	+	lysS	NIAGMN_10330	0.70	+0.1
2,032,377	+	lysS	NIAGMN_10330	0.70	-0.2
2,032,378	-	lysS	NIAGMN_10330	0.70	+0.8
2,032,378	-	lysS	NIAGMN_10330	0.70	+0.4
2,032,378	-	lysS	NIAGMN_10330	0.70	+1.0
2,032,378	-	lysS	NIAGMN_10330	0.70	-0.2
2,032,387	+	lysS	NIAGMN_10330	0.70	+2.2
2,032,394	-	lysS	NIAGMN_10330	0.71	+0.0
2,032,396	+	lysS	NIAGMN_10330	0.71	+2.2
2,032,397	-	lysS	NIAGMN_10330	0.71	+2.0
2,032,402	-	lysS	NIAGMN_10330	0.71	-0.6
2,032,426	+	lysS	NIAGMN_10330	0.73	+0.2
2,032,426	+	lysS	NIAGMN_10330	0.73	-0.9
2,032,426	+	lysS	NIAGMN_10330	0.73	-1.1
2,032,427	-	lysS	NIAGMN_10330	0.73	+0.4
2,032,427	-	lysS	NIAGMN_10330	0.73	+0.4
2,032,427	-	lysS	NIAGMN_10330	0.73	+0.1
2,032,483	+	lysS	NIAGMN_10330	0.77	+0.0
2,032,526	-	lysS	NIAGMN_10330	0.80	+0.0
2,032,534	+	lysS	NIAGMN_10330	0.80	+1.6
2,032,534	+	lysS	NIAGMN_10330	0.80	-0.5
2,032,605	+	lysS	NIAGMN_10330	0.85	-0.8
2,032,606	-	lysS	NIAGMN_10330	0.85	-0.7
2,032,685	+				-0.9
2,032,685	+				-0.9
2,032,685	+				+0.2
2,032,686	-				-1.0
2,032,686	-				-0.7
2,032,686	-				+0.2
2,032,716	-				+1.0
2,032,716	-				+0.4
2,032,765	+				-0.7
2,032,765	+				+2.0
2,032,765	+				-0.8
2,032,766	-				+1.8
2,032,777	+				-0.2
2,032,786	+				-1.6
2,032,787	-				-0.2
2,032,787	-				+0.9
2,032,789	+				+0.8
2,032,789	+				+0.3
2,032,790	-				+1.1
2,032,844	+				-0.3
2,032,945	+				-1.0
2,032,946	-				+0.2
2,032,946	-				+0.4
2,032,946	-				-0.0
2,032,946	-				-1.9
2,032,946	-				+0.7
2,033,022	-	ghoT	NIAGMN_10335	0.40	+0.4
2,033,026	-	ghoT	NIAGMN_10335	0.42	+2.6
2,033,119	-				+0.5
2,033,176	+				+0.3
2,033,192	+	ghoS	NIAGMN_10340	0.13	+0.3
2,033,193	-	ghoS	NIAGMN_10340	0.13	-0.8
2,033,221	-	ghoS	NIAGMN_10340	0.23	+0.0
2,033,234	+	ghoS	NIAGMN_10340	0.27	+0.5
2,033,235	-	ghoS	NIAGMN_10340	0.27	-0.4
2,033,244	+	ghoS	NIAGMN_10340	0.30	-1.0
2,033,313	+	ghoS	NIAGMN_10340	0.54	-1.9
2,033,321	-	ghoS	NIAGMN_10340	0.56	+0.0
2,033,321	-	ghoS	NIAGMN_10340	0.56	+0.0
2,033,321	-	ghoS	NIAGMN_10340	0.56	+1.0
2,033,336	+	ghoS	NIAGMN_10340	0.61	-1.1
2,033,356	+	ghoS	NIAGMN_10340	0.68	-0.5
2,033,357	-	ghoS	NIAGMN_10340	0.68	-0.4
2,033,423	-				-1.3
2,033,426	+				+1.0
2,033,427	-				+0.4
2,033,450	+				-1.8
2,033,453	+				-2.6
2,033,463	-				+0.7
2,033,465	-				+0.1
2,033,468	+				-0.4
2,033,469	-				-0.8
2,033,523	-				-1.5
2,033,667	+				+0.0
2,033,696	+				+0.7
2,033,737	+	yjdJ	NIAGMN_10345	0.22	-0.6
2,033,738	-	yjdJ	NIAGMN_10345	0.22	+0.2