Strain Fitness in Escherichia coli ECRC102 around NIAGMN_00505

Experiment: Bas14

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas14
79,531	+				-0.5
79,532	-				+0.1
79,541	-				+1.3
79,837	+	blr	NIAGMN_00495	0.67	+0.0
79,857	+	blr	NIAGMN_00495	0.83	+3.3
79,857	+	blr	NIAGMN_00495	0.83	+0.0
79,860	+	blr	NIAGMN_00495	0.85	+1.7
79,860	+	blr	NIAGMN_00495	0.85	-0.3
79,876	+				+0.7
79,876	+				+0.4
79,877	-				+2.0
80,056	+				-0.2
80,110	-				-0.2
80,166	+				-0.4
80,228	+	ydgT	NIAGMN_00500	0.36	+1.0
80,264	+	ydgT	NIAGMN_00500	0.52	+0.7
80,397	+				+0.1
80,400	+				+1.7
80,451	+				+3.3
80,451	+				+0.7
80,719	+	ydgK	NIAGMN_00505	0.61	-0.1
80,721	+	ydgK	NIAGMN_00505	0.61	-0.3
80,814	+	ydgK	NIAGMN_00505	0.82	+1.3
80,953	+				-0.3
80,978	+				-0.1
80,978	+				-1.3
81,128	-	rsxA	NIAGMN_00510	0.27	+1.7
81,169	+	rsxA	NIAGMN_00510	0.34	-1.8
81,200	-	rsxA	NIAGMN_00510	0.40	+0.7
81,200	-	rsxA	NIAGMN_00510	0.40	+0.1
81,295	+	rsxA	NIAGMN_00510	0.56	-1.3
81,337	+	rsxA	NIAGMN_00510	0.63	-1.6
81,475	+	rsxA	NIAGMN_00510	0.87	+0.1
81,490	-	rsxA	NIAGMN_00510	0.90	-1.9
81,505	+				-1.3
81,505	+				-0.6
81,505	+				-0.9
81,520	+				-0.3
81,548	+				+0.1
81,558	+				+0.1