Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02772 and MPMX26_02773 are separated by 400 nucleotides MPMX26_02773 and MPMX26_02774 are separated by 108 nucleotides
MPMX26_02772: MPMX26_02772 - putative FAD-linked oxidoreductase, at 2,855,579 to 2,856,988
_02772
MPMX26_02773: MPMX26_02773 - D-3-phosphoglycerate dehydrogenase, at 2,857,389 to 2,858,621
_02773
MPMX26_02774: MPMX26_02774 - Threonine/homoserine exporter RhtA, at 2,858,730 to 2,859,635
_02774
Position (kb)
2857
2858
2859 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 2856.403 kb on - strand, within MPMX26_02772 at 2856.593 kb on - strand, within MPMX26_02772 at 2856.599 kb on - strand, within MPMX26_02772 at 2856.604 kb on - strand, within MPMX26_02772 at 2856.617 kb on - strand, within MPMX26_02772 at 2856.701 kb on - strand, within MPMX26_02772 at 2856.770 kb on - strand, within MPMX26_02772 at 2856.788 kb on - strand, within MPMX26_02772 at 2856.788 kb on - strand, within MPMX26_02772 at 2856.825 kb on + strand, within MPMX26_02772 at 2856.833 kb on - strand, within MPMX26_02772 at 2856.833 kb on - strand, within MPMX26_02772 at 2856.833 kb on - strand, within MPMX26_02772 at 2856.833 kb on - strand, within MPMX26_02772 at 2856.881 kb on - strand at 2856.881 kb on - strand at 2857.391 kb on + strand at 2857.482 kb on + strand at 2857.482 kb on + strand at 2857.502 kb on + strand at 2857.502 kb on + strand at 2857.514 kb on + strand, within MPMX26_02773 at 2857.541 kb on + strand, within MPMX26_02773 at 2857.581 kb on + strand, within MPMX26_02773 at 2857.649 kb on + strand, within MPMX26_02773 at 2857.781 kb on + strand, within MPMX26_02773 at 2857.808 kb on + strand, within MPMX26_02773 at 2857.848 kb on + strand, within MPMX26_02773 at 2857.848 kb on + strand, within MPMX26_02773 at 2857.857 kb on + strand, within MPMX26_02773 at 2858.133 kb on + strand, within MPMX26_02773 at 2858.148 kb on + strand, within MPMX26_02773 at 2858.175 kb on + strand, within MPMX26_02773 at 2858.175 kb on + strand, within MPMX26_02773 at 2858.175 kb on + strand, within MPMX26_02773 at 2858.175 kb on + strand, within MPMX26_02773 at 2858.229 kb on + strand, within MPMX26_02773 at 2858.335 kb on + strand, within MPMX26_02773 at 2858.340 kb on + strand, within MPMX26_02773 at 2858.345 kb on + strand, within MPMX26_02773 at 2858.345 kb on + strand, within MPMX26_02773 at 2858.345 kb on + strand, within MPMX26_02773 at 2858.347 kb on + strand, within MPMX26_02773 at 2858.380 kb on + strand, within MPMX26_02773 at 2858.400 kb on + strand, within MPMX26_02773 at 2858.400 kb on + strand, within MPMX26_02773 at 2858.400 kb on + strand, within MPMX26_02773 at 2858.400 kb on + strand, within MPMX26_02773 at 2858.412 kb on + strand, within MPMX26_02773 at 2858.412 kb on + strand, within MPMX26_02773 at 2858.412 kb on + strand, within MPMX26_02773 at 2858.412 kb on + strand, within MPMX26_02773 at 2858.412 kb on + strand, within MPMX26_02773 at 2858.413 kb on + strand, within MPMX26_02773 at 2858.461 kb on + strand, within MPMX26_02773 at 2858.480 kb on + strand, within MPMX26_02773 at 2858.517 kb on + strand at 2858.592 kb on + strand at 2858.605 kb on + strand at 2858.605 kb on + strand at 2858.605 kb on + strand at 2858.605 kb on + strand at 2858.605 kb on + strand at 2858.607 kb on + strand at 2858.610 kb on + strand at 2858.610 kb on + strand at 2858.610 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.615 kb on + strand at 2858.623 kb on - strand at 2858.641 kb on + strand at 2858.648 kb on + strand at 2858.656 kb on + strand at 2858.687 kb on - strand at 2858.687 kb on - strand at 2858.796 kb on + strand at 2858.796 kb on + strand at 2858.796 kb on + strand at 2858.804 kb on - strand at 2858.823 kb on + strand, within MPMX26_02774 at 2858.979 kb on + strand, within MPMX26_02774 at 2859.030 kb on + strand, within MPMX26_02774 at 2859.047 kb on + strand, within MPMX26_02774 at 2859.050 kb on + strand, within MPMX26_02774 at 2859.111 kb on + strand, within MPMX26_02774 at 2859.167 kb on + strand, within MPMX26_02774 at 2859.167 kb on + strand, within MPMX26_02774 at 2859.167 kb on + strand, within MPMX26_02774 at 2859.171 kb on + strand, within MPMX26_02774 at 2859.200 kb on + strand, within MPMX26_02774 at 2859.269 kb on + strand, within MPMX26_02774 at 2859.378 kb on + strand, within MPMX26_02774 at 2859.422 kb on + strand, within MPMX26_02774 at 2859.450 kb on + strand, within MPMX26_02774 at 2859.450 kb on + strand, within MPMX26_02774 at 2859.563 kb on + strand at 2859.614 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,856,403 - MPMX26_02772 0.58 -2.6 2,856,593 - MPMX26_02772 0.72 -1.6 2,856,599 - MPMX26_02772 0.72 -1.4 2,856,604 - MPMX26_02772 0.73 -1.2 2,856,617 - MPMX26_02772 0.74 -0.3 2,856,701 - MPMX26_02772 0.80 -0.9 2,856,770 - MPMX26_02772 0.84 -0.1 2,856,788 - MPMX26_02772 0.86 -0.9 2,856,788 - MPMX26_02772 0.86 -1.9 2,856,825 + MPMX26_02772 0.88 -1.7 2,856,833 - MPMX26_02772 0.89 -1.6 2,856,833 - MPMX26_02772 0.89 -2.0 2,856,833 - MPMX26_02772 0.89 -2.1 2,856,833 - MPMX26_02772 0.89 -2.3 2,856,881 - -2.7 2,856,881 - -2.3 2,857,391 + -0.5 2,857,482 + -2.0 2,857,482 + -3.6 2,857,502 + -2.4 2,857,502 + -2.5 2,857,514 + MPMX26_02773 0.10 -1.0 2,857,541 + MPMX26_02773 0.12 -1.4 2,857,581 + MPMX26_02773 0.16 -3.7 2,857,649 + MPMX26_02773 0.21 -2.6 2,857,781 + MPMX26_02773 0.32 -1.9 2,857,808 + MPMX26_02773 0.34 -1.8 2,857,848 + MPMX26_02773 0.37 -1.5 2,857,848 + MPMX26_02773 0.37 -3.2 2,857,857 + MPMX26_02773 0.38 -2.5 2,858,133 + MPMX26_02773 0.60 -2.9 2,858,148 + MPMX26_02773 0.62 -2.0 2,858,175 + MPMX26_02773 0.64 -1.8 2,858,175 + MPMX26_02773 0.64 -2.5 2,858,175 + MPMX26_02773 0.64 -2.0 2,858,175 + MPMX26_02773 0.64 -3.0 2,858,229 + MPMX26_02773 0.68 -1.0 2,858,335 + MPMX26_02773 0.77 -0.4 2,858,340 + MPMX26_02773 0.77 -4.2 2,858,345 + MPMX26_02773 0.78 -4.5 2,858,345 + MPMX26_02773 0.78 -3.8 2,858,345 + MPMX26_02773 0.78 -5.6 2,858,347 + MPMX26_02773 0.78 -0.5 2,858,380 + MPMX26_02773 0.80 +0.4 2,858,400 + MPMX26_02773 0.82 -0.2 2,858,400 + MPMX26_02773 0.82 -5.0 2,858,400 + MPMX26_02773 0.82 -4.8 2,858,400 + MPMX26_02773 0.82 -2.5 2,858,412 + MPMX26_02773 0.83 -3.2 2,858,412 + MPMX26_02773 0.83 -4.5 2,858,412 + MPMX26_02773 0.83 -4.3 2,858,412 + MPMX26_02773 0.83 -4.3 2,858,412 + MPMX26_02773 0.83 -2.9 2,858,413 + MPMX26_02773 0.83 -4.1 2,858,461 + MPMX26_02773 0.87 -3.1 2,858,480 + MPMX26_02773 0.88 -2.9 2,858,517 + -5.0 2,858,592 + -1.5 2,858,605 + +0.1 2,858,605 + -0.6 2,858,605 + -0.3 2,858,605 + -0.2 2,858,605 + -0.4 2,858,607 + -3.7 2,858,610 + -3.0 2,858,610 + -3.4 2,858,610 + -5.9 2,858,615 + -0.1 2,858,615 + +0.8 2,858,615 + -0.1 2,858,615 + -0.3 2,858,615 + +0.1 2,858,615 + +0.1 2,858,615 + -0.2 2,858,615 + +0.3 2,858,615 + -0.1 2,858,615 + -0.3 2,858,615 + +0.1 2,858,615 + -0.0 2,858,615 + +0.6 2,858,615 + +0.1 2,858,615 + +0.3 2,858,615 + -1.1 2,858,615 + +0.2 2,858,615 + +0.3 2,858,615 + +0.1 2,858,615 + -0.1 2,858,615 + +0.1 2,858,615 + -0.4 2,858,615 + +0.1 2,858,615 + +0.5 2,858,615 + -0.1 2,858,615 + +0.5 2,858,615 + +0.1 2,858,615 + -0.6 2,858,615 + +0.1 2,858,615 + +0.0 2,858,615 + -0.4 2,858,623 - -0.2 2,858,641 + -0.2 2,858,648 + -0.7 2,858,656 + -0.0 2,858,687 - +1.1 2,858,687 - +0.2 2,858,796 + -0.5 2,858,796 + +0.3 2,858,796 + +2.0 2,858,804 - -0.1 2,858,823 + MPMX26_02774 0.10 -0.8 2,858,979 + MPMX26_02774 0.27 +0.5 2,859,030 + MPMX26_02774 0.33 +0.4 2,859,047 + MPMX26_02774 0.35 -0.0 2,859,050 + MPMX26_02774 0.35 -0.4 2,859,111 + MPMX26_02774 0.42 -0.3 2,859,167 + MPMX26_02774 0.48 -0.9 2,859,167 + MPMX26_02774 0.48 +0.9 2,859,167 + MPMX26_02774 0.48 +0.5 2,859,171 + MPMX26_02774 0.49 +0.5 2,859,200 + MPMX26_02774 0.52 -1.0 2,859,269 + MPMX26_02774 0.59 -0.2 2,859,378 + MPMX26_02774 0.72 +1.3 2,859,422 + MPMX26_02774 0.76 +0.6 2,859,450 + MPMX26_02774 0.79 +0.9 2,859,450 + MPMX26_02774 0.79 +0.2 2,859,563 + +0.3 2,859,614 + +1.0
Or see this region's nucleotide sequence