Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02773

Experiment: D,L-Lactate (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02772 and MPMX26_02773 are separated by 400 nucleotidesMPMX26_02773 and MPMX26_02774 are separated by 108 nucleotides MPMX26_02772: MPMX26_02772 - putative FAD-linked oxidoreductase, at 2,855,579 to 2,856,988 _02772 MPMX26_02773: MPMX26_02773 - D-3-phosphoglycerate dehydrogenase, at 2,857,389 to 2,858,621 _02773 MPMX26_02774: MPMX26_02774 - Threonine/homoserine exporter RhtA, at 2,858,730 to 2,859,635 _02774 Position (kb) 2857 2858 2859Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 2856.403 kb on - strand, within MPMX26_02772at 2856.593 kb on - strand, within MPMX26_02772at 2856.599 kb on - strand, within MPMX26_02772at 2856.604 kb on - strand, within MPMX26_02772at 2856.617 kb on - strand, within MPMX26_02772at 2856.701 kb on - strand, within MPMX26_02772at 2856.770 kb on - strand, within MPMX26_02772at 2856.788 kb on - strand, within MPMX26_02772at 2856.788 kb on - strand, within MPMX26_02772at 2856.825 kb on + strand, within MPMX26_02772at 2856.833 kb on - strand, within MPMX26_02772at 2856.833 kb on - strand, within MPMX26_02772at 2856.833 kb on - strand, within MPMX26_02772at 2856.833 kb on - strand, within MPMX26_02772at 2856.881 kb on - strandat 2856.881 kb on - strandat 2857.391 kb on + strandat 2857.482 kb on + strandat 2857.482 kb on + strandat 2857.502 kb on + strandat 2857.502 kb on + strandat 2857.514 kb on + strand, within MPMX26_02773at 2857.541 kb on + strand, within MPMX26_02773at 2857.581 kb on + strand, within MPMX26_02773at 2857.649 kb on + strand, within MPMX26_02773at 2857.781 kb on + strand, within MPMX26_02773at 2857.808 kb on + strand, within MPMX26_02773at 2857.848 kb on + strand, within MPMX26_02773at 2857.848 kb on + strand, within MPMX26_02773at 2857.857 kb on + strand, within MPMX26_02773at 2858.133 kb on + strand, within MPMX26_02773at 2858.148 kb on + strand, within MPMX26_02773at 2858.175 kb on + strand, within MPMX26_02773at 2858.175 kb on + strand, within MPMX26_02773at 2858.175 kb on + strand, within MPMX26_02773at 2858.175 kb on + strand, within MPMX26_02773at 2858.229 kb on + strand, within MPMX26_02773at 2858.335 kb on + strand, within MPMX26_02773at 2858.340 kb on + strand, within MPMX26_02773at 2858.345 kb on + strand, within MPMX26_02773at 2858.345 kb on + strand, within MPMX26_02773at 2858.345 kb on + strand, within MPMX26_02773at 2858.347 kb on + strand, within MPMX26_02773at 2858.380 kb on + strand, within MPMX26_02773at 2858.400 kb on + strand, within MPMX26_02773at 2858.400 kb on + strand, within MPMX26_02773at 2858.400 kb on + strand, within MPMX26_02773at 2858.400 kb on + strand, within MPMX26_02773at 2858.412 kb on + strand, within MPMX26_02773at 2858.412 kb on + strand, within MPMX26_02773at 2858.412 kb on + strand, within MPMX26_02773at 2858.412 kb on + strand, within MPMX26_02773at 2858.412 kb on + strand, within MPMX26_02773at 2858.413 kb on + strand, within MPMX26_02773at 2858.461 kb on + strand, within MPMX26_02773at 2858.480 kb on + strand, within MPMX26_02773at 2858.517 kb on + strandat 2858.592 kb on + strandat 2858.605 kb on + strandat 2858.605 kb on + strandat 2858.605 kb on + strandat 2858.605 kb on + strandat 2858.605 kb on + strandat 2858.607 kb on + strandat 2858.610 kb on + strandat 2858.610 kb on + strandat 2858.610 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.615 kb on + strandat 2858.623 kb on - strandat 2858.641 kb on + strandat 2858.648 kb on + strandat 2858.656 kb on + strandat 2858.687 kb on - strandat 2858.687 kb on - strandat 2858.796 kb on + strandat 2858.796 kb on + strandat 2858.796 kb on + strandat 2858.804 kb on - strandat 2858.823 kb on + strand, within MPMX26_02774at 2858.979 kb on + strand, within MPMX26_02774at 2859.030 kb on + strand, within MPMX26_02774at 2859.047 kb on + strand, within MPMX26_02774at 2859.050 kb on + strand, within MPMX26_02774at 2859.111 kb on + strand, within MPMX26_02774at 2859.167 kb on + strand, within MPMX26_02774at 2859.167 kb on + strand, within MPMX26_02774at 2859.167 kb on + strand, within MPMX26_02774at 2859.171 kb on + strand, within MPMX26_02774at 2859.200 kb on + strand, within MPMX26_02774at 2859.269 kb on + strand, within MPMX26_02774at 2859.378 kb on + strand, within MPMX26_02774at 2859.422 kb on + strand, within MPMX26_02774at 2859.450 kb on + strand, within MPMX26_02774at 2859.450 kb on + strand, within MPMX26_02774at 2859.563 kb on + strandat 2859.614 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
remove
2,856,403 - MPMX26_02772 0.58 -2.6
2,856,593 - MPMX26_02772 0.72 -1.6
2,856,599 - MPMX26_02772 0.72 -1.4
2,856,604 - MPMX26_02772 0.73 -1.2
2,856,617 - MPMX26_02772 0.74 -0.3
2,856,701 - MPMX26_02772 0.80 -0.9
2,856,770 - MPMX26_02772 0.84 -0.1
2,856,788 - MPMX26_02772 0.86 -0.9
2,856,788 - MPMX26_02772 0.86 -1.9
2,856,825 + MPMX26_02772 0.88 -1.7
2,856,833 - MPMX26_02772 0.89 -1.6
2,856,833 - MPMX26_02772 0.89 -2.0
2,856,833 - MPMX26_02772 0.89 -2.1
2,856,833 - MPMX26_02772 0.89 -2.3
2,856,881 - -2.7
2,856,881 - -2.3
2,857,391 + -0.5
2,857,482 + -2.0
2,857,482 + -3.6
2,857,502 + -2.4
2,857,502 + -2.5
2,857,514 + MPMX26_02773 0.10 -1.0
2,857,541 + MPMX26_02773 0.12 -1.4
2,857,581 + MPMX26_02773 0.16 -3.7
2,857,649 + MPMX26_02773 0.21 -2.6
2,857,781 + MPMX26_02773 0.32 -1.9
2,857,808 + MPMX26_02773 0.34 -1.8
2,857,848 + MPMX26_02773 0.37 -1.5
2,857,848 + MPMX26_02773 0.37 -3.2
2,857,857 + MPMX26_02773 0.38 -2.5
2,858,133 + MPMX26_02773 0.60 -2.9
2,858,148 + MPMX26_02773 0.62 -2.0
2,858,175 + MPMX26_02773 0.64 -1.8
2,858,175 + MPMX26_02773 0.64 -2.5
2,858,175 + MPMX26_02773 0.64 -2.0
2,858,175 + MPMX26_02773 0.64 -3.0
2,858,229 + MPMX26_02773 0.68 -1.0
2,858,335 + MPMX26_02773 0.77 -0.4
2,858,340 + MPMX26_02773 0.77 -4.2
2,858,345 + MPMX26_02773 0.78 -4.5
2,858,345 + MPMX26_02773 0.78 -3.8
2,858,345 + MPMX26_02773 0.78 -5.6
2,858,347 + MPMX26_02773 0.78 -0.5
2,858,380 + MPMX26_02773 0.80 +0.4
2,858,400 + MPMX26_02773 0.82 -0.2
2,858,400 + MPMX26_02773 0.82 -5.0
2,858,400 + MPMX26_02773 0.82 -4.8
2,858,400 + MPMX26_02773 0.82 -2.5
2,858,412 + MPMX26_02773 0.83 -3.2
2,858,412 + MPMX26_02773 0.83 -4.5
2,858,412 + MPMX26_02773 0.83 -4.3
2,858,412 + MPMX26_02773 0.83 -4.3
2,858,412 + MPMX26_02773 0.83 -2.9
2,858,413 + MPMX26_02773 0.83 -4.1
2,858,461 + MPMX26_02773 0.87 -3.1
2,858,480 + MPMX26_02773 0.88 -2.9
2,858,517 + -5.0
2,858,592 + -1.5
2,858,605 + +0.1
2,858,605 + -0.6
2,858,605 + -0.3
2,858,605 + -0.2
2,858,605 + -0.4
2,858,607 + -3.7
2,858,610 + -3.0
2,858,610 + -3.4
2,858,610 + -5.9
2,858,615 + -0.1
2,858,615 + +0.8
2,858,615 + -0.1
2,858,615 + -0.3
2,858,615 + +0.1
2,858,615 + +0.1
2,858,615 + -0.2
2,858,615 + +0.3
2,858,615 + -0.1
2,858,615 + -0.3
2,858,615 + +0.1
2,858,615 + -0.0
2,858,615 + +0.6
2,858,615 + +0.1
2,858,615 + +0.3
2,858,615 + -1.1
2,858,615 + +0.2
2,858,615 + +0.3
2,858,615 + +0.1
2,858,615 + -0.1
2,858,615 + +0.1
2,858,615 + -0.4
2,858,615 + +0.1
2,858,615 + +0.5
2,858,615 + -0.1
2,858,615 + +0.5
2,858,615 + +0.1
2,858,615 + -0.6
2,858,615 + +0.1
2,858,615 + +0.0
2,858,615 + -0.4
2,858,623 - -0.2
2,858,641 + -0.2
2,858,648 + -0.7
2,858,656 + -0.0
2,858,687 - +1.1
2,858,687 - +0.2
2,858,796 + -0.5
2,858,796 + +0.3
2,858,796 + +2.0
2,858,804 - -0.1
2,858,823 + MPMX26_02774 0.10 -0.8
2,858,979 + MPMX26_02774 0.27 +0.5
2,859,030 + MPMX26_02774 0.33 +0.4
2,859,047 + MPMX26_02774 0.35 -0.0
2,859,050 + MPMX26_02774 0.35 -0.4
2,859,111 + MPMX26_02774 0.42 -0.3
2,859,167 + MPMX26_02774 0.48 -0.9
2,859,167 + MPMX26_02774 0.48 +0.9
2,859,167 + MPMX26_02774 0.48 +0.5
2,859,171 + MPMX26_02774 0.49 +0.5
2,859,200 + MPMX26_02774 0.52 -1.0
2,859,269 + MPMX26_02774 0.59 -0.2
2,859,378 + MPMX26_02774 0.72 +1.3
2,859,422 + MPMX26_02774 0.76 +0.6
2,859,450 + MPMX26_02774 0.79 +0.9
2,859,450 + MPMX26_02774 0.79 +0.2
2,859,563 + +0.3
2,859,614 + +1.0

Or see this region's nucleotide sequence