Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02179 and MPMX26_02180 are separated by 112 nucleotides MPMX26_02180 and MPMX26_02181 are separated by 227 nucleotides MPMX26_02181 and MPMX26_02182 are separated by 118 nucleotides
MPMX26_02179: MPMX26_02179 - 2,3-dehydroadipyl-CoA hydratase, at 2,232,507 to 2,233,355
_02179
MPMX26_02180: MPMX26_02180 - malonic semialdehyde reductase RutE, at 2,233,468 to 2,234,250
_02180
MPMX26_02181: MPMX26_02181 - GTP cyclohydrolase 1 type 2, at 2,234,478 to 2,234,792
_02181
MPMX26_02182: MPMX26_02182 - hypothetical protein, at 2,234,911 to 2,235,762
_02182
Position (kb)
2233
2234
2235 Strain fitness (log2 ratio)
-1
0
1
2 at 2232.510 kb on + strand at 2232.510 kb on + strand at 2232.510 kb on + strand at 2232.510 kb on + strand at 2232.510 kb on + strand at 2232.517 kb on + strand at 2232.681 kb on + strand, within MPMX26_02179 at 2232.764 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.893 kb on + strand, within MPMX26_02179 at 2232.903 kb on + strand, within MPMX26_02179 at 2232.990 kb on + strand, within MPMX26_02179 at 2232.995 kb on + strand, within MPMX26_02179 at 2233.013 kb on + strand, within MPMX26_02179 at 2233.059 kb on + strand, within MPMX26_02179 at 2233.059 kb on + strand, within MPMX26_02179 at 2233.064 kb on + strand, within MPMX26_02179 at 2233.199 kb on + strand, within MPMX26_02179 at 2233.241 kb on + strand, within MPMX26_02179 at 2233.295 kb on + strand at 2233.295 kb on + strand at 2233.295 kb on + strand at 2233.305 kb on + strand at 2233.512 kb on + strand at 2233.645 kb on + strand, within MPMX26_02180 at 2233.702 kb on + strand, within MPMX26_02180 at 2233.891 kb on + strand, within MPMX26_02180 at 2233.899 kb on + strand, within MPMX26_02180 at 2233.964 kb on + strand, within MPMX26_02180 at 2234.013 kb on + strand, within MPMX26_02180 at 2234.023 kb on + strand, within MPMX26_02180 at 2234.061 kb on + strand, within MPMX26_02180 at 2234.061 kb on + strand, within MPMX26_02180 at 2234.094 kb on + strand, within MPMX26_02180 at 2234.112 kb on + strand, within MPMX26_02180 at 2234.184 kb on + strand at 2234.184 kb on + strand at 2234.184 kb on + strand at 2234.194 kb on + strand at 2234.211 kb on + strand at 2234.211 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 2,232,510 + -0.7 2,232,510 + +0.7 2,232,510 + -0.5 2,232,510 + -0.5 2,232,510 + -0.3 2,232,517 + -0.2 2,232,681 + MPMX26_02179 0.20 -0.6 2,232,764 + MPMX26_02179 0.30 -0.0 2,232,893 + MPMX26_02179 0.45 +0.7 2,232,893 + MPMX26_02179 0.45 -0.1 2,232,893 + MPMX26_02179 0.45 -0.6 2,232,893 + MPMX26_02179 0.45 +0.5 2,232,893 + MPMX26_02179 0.45 +0.0 2,232,893 + MPMX26_02179 0.45 -0.2 2,232,893 + MPMX26_02179 0.45 -0.1 2,232,893 + MPMX26_02179 0.45 -0.5 2,232,893 + MPMX26_02179 0.45 +0.8 2,232,893 + MPMX26_02179 0.45 +1.4 2,232,893 + MPMX26_02179 0.45 +0.8 2,232,893 + MPMX26_02179 0.45 +0.2 2,232,893 + MPMX26_02179 0.45 +0.1 2,232,893 + MPMX26_02179 0.45 +0.1 2,232,893 + MPMX26_02179 0.45 +0.4 2,232,903 + MPMX26_02179 0.47 -0.1 2,232,990 + MPMX26_02179 0.57 -0.1 2,232,995 + MPMX26_02179 0.57 +0.5 2,233,013 + MPMX26_02179 0.60 -0.3 2,233,059 + MPMX26_02179 0.65 +0.4 2,233,059 + MPMX26_02179 0.65 +0.2 2,233,064 + MPMX26_02179 0.66 -0.3 2,233,199 + MPMX26_02179 0.82 +1.0 2,233,241 + MPMX26_02179 0.86 -0.3 2,233,295 + +0.2 2,233,295 + +0.5 2,233,295 + -0.1 2,233,305 + +0.6 2,233,512 + +0.6 2,233,645 + MPMX26_02180 0.23 -0.2 2,233,702 + MPMX26_02180 0.30 +2.1 2,233,891 + MPMX26_02180 0.54 +0.1 2,233,899 + MPMX26_02180 0.55 +0.2 2,233,964 + MPMX26_02180 0.63 -0.4 2,234,013 + MPMX26_02180 0.70 +0.5 2,234,023 + MPMX26_02180 0.71 +0.3 2,234,061 + MPMX26_02180 0.76 +0.6 2,234,061 + MPMX26_02180 0.76 -0.3 2,234,094 + MPMX26_02180 0.80 +0.2 2,234,112 + MPMX26_02180 0.82 -0.5 2,234,184 + -1.1 2,234,184 + +0.3 2,234,184 + -0.1 2,234,194 + +0.3 2,234,211 + -0.4 2,234,211 + +0.6
Or see this region's nucleotide sequence