Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00936

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00934 and MPMX26_00935 are separated by 89 nucleotidesMPMX26_00935 and MPMX26_00936 are separated by 8 nucleotidesMPMX26_00936 and MPMX26_00937 overlap by 4 nucleotides MPMX26_00934: MPMX26_00934 - hypothetical protein, at 984,368 to 985,390 _00934 MPMX26_00935: MPMX26_00935 - Multidrug transporter EmrE, at 985,480 to 985,809 _00935 MPMX26_00936: MPMX26_00936 - hypothetical protein, at 985,818 to 986,699 _00936 MPMX26_00937: MPMX26_00937 - hypothetical protein, at 986,696 to 987,703 _00937 Position (kb) 985 986 987Strain fitness (log2 ratio) -1 0 1at 986.180 kb on - strand, within MPMX26_00936at 986.238 kb on + strand, within MPMX26_00936at 987.242 kb on - strand, within MPMX26_00937at 987.242 kb on - strand, within MPMX26_00937

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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986,180 - MPMX26_00936 0.41 -1.4
986,238 + MPMX26_00936 0.48 -0.8
987,242 - MPMX26_00937 0.54 -0.4
987,242 - MPMX26_00937 0.54 -0.8

Or see this region's nucleotide sequence