Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00456

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00454 and MPMX26_00455 are separated by 37 nucleotidesMPMX26_00455 and MPMX26_00456 overlap by 1 nucleotidesMPMX26_00456 and MPMX26_00457 are separated by 138 nucleotides MPMX26_00454: MPMX26_00454 - hypothetical protein, at 487,187 to 488,206 _00454 MPMX26_00455: MPMX26_00455 - hypothetical protein, at 488,244 to 489,182 _00455 MPMX26_00456: MPMX26_00456 - hypothetical protein, at 489,182 to 489,400 _00456 MPMX26_00457: MPMX26_00457 - Aspartate--tRNA(Asp/Asn) ligase, at 489,539 to 491,317 _00457 Position (kb) 489 490Strain fitness (log2 ratio) -1 0 1at 488.256 kb on - strandat 488.281 kb on - strandat 488.301 kb on - strandat 488.301 kb on - strandat 488.301 kb on - strandat 488.311 kb on - strandat 488.327 kb on - strandat 488.337 kb on - strandat 488.465 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.547 kb on - strand, within MPMX26_00455at 488.590 kb on - strand, within MPMX26_00455at 488.590 kb on - strand, within MPMX26_00455at 488.590 kb on - strand, within MPMX26_00455at 488.614 kb on - strand, within MPMX26_00455at 488.618 kb on - strand, within MPMX26_00455at 488.630 kb on - strand, within MPMX26_00455at 488.640 kb on - strand, within MPMX26_00455at 488.659 kb on - strand, within MPMX26_00455at 488.779 kb on - strand, within MPMX26_00455at 489.017 kb on - strand, within MPMX26_00455at 489.060 kb on - strand, within MPMX26_00455at 489.209 kb on - strand, within MPMX26_00456at 489.219 kb on - strand, within MPMX26_00456at 489.221 kb on - strand, within MPMX26_00456at 489.221 kb on - strand, within MPMX26_00456at 489.221 kb on - strand, within MPMX26_00456at 489.221 kb on - strand, within MPMX26_00456at 489.221 kb on - strand, within MPMX26_00456at 489.221 kb on - strand, within MPMX26_00456at 489.221 kb on - strand, within MPMX26_00456at 489.221 kb on - strand, within MPMX26_00456at 489.226 kb on - strand, within MPMX26_00456at 489.231 kb on - strand, within MPMX26_00456at 489.231 kb on - strand, within MPMX26_00456at 489.241 kb on - strand, within MPMX26_00456at 489.246 kb on - strand, within MPMX26_00456at 489.246 kb on - strand, within MPMX26_00456at 489.246 kb on - strand, within MPMX26_00456at 489.325 kb on - strand, within MPMX26_00456at 489.385 kb on - strandat 489.390 kb on - strandat 489.390 kb on - strandat 489.405 kb on - strandat 489.595 kb on - strandat 489.600 kb on - strandat 489.605 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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488,256 - +0.4
488,281 - +0.3
488,301 - +0.6
488,301 - +0.0
488,301 - -0.0
488,311 - -0.6
488,327 - +0.3
488,337 - +0.2
488,465 - MPMX26_00455 0.24 -0.5
488,544 - MPMX26_00455 0.32 +0.2
488,544 - MPMX26_00455 0.32 -0.0
488,544 - MPMX26_00455 0.32 -0.1
488,544 - MPMX26_00455 0.32 -0.3
488,544 - MPMX26_00455 0.32 +0.2
488,544 - MPMX26_00455 0.32 +0.1
488,544 - MPMX26_00455 0.32 +0.5
488,544 - MPMX26_00455 0.32 +0.4
488,544 - MPMX26_00455 0.32 -0.2
488,547 - MPMX26_00455 0.32 +0.5
488,590 - MPMX26_00455 0.37 +0.8
488,590 - MPMX26_00455 0.37 -0.1
488,590 - MPMX26_00455 0.37 -0.3
488,614 - MPMX26_00455 0.39 +0.2
488,618 - MPMX26_00455 0.40 +0.3
488,630 - MPMX26_00455 0.41 +0.2
488,640 - MPMX26_00455 0.42 +0.4
488,659 - MPMX26_00455 0.44 +0.6
488,779 - MPMX26_00455 0.57 +0.4
489,017 - MPMX26_00455 0.82 +0.2
489,060 - MPMX26_00455 0.87 +0.2
489,209 - MPMX26_00456 0.12 +0.2
489,219 - MPMX26_00456 0.17 +0.2
489,221 - MPMX26_00456 0.18 -0.4
489,221 - MPMX26_00456 0.18 -0.6
489,221 - MPMX26_00456 0.18 -0.0
489,221 - MPMX26_00456 0.18 +0.2
489,221 - MPMX26_00456 0.18 +0.0
489,221 - MPMX26_00456 0.18 +0.4
489,221 - MPMX26_00456 0.18 +0.8
489,221 - MPMX26_00456 0.18 -0.2
489,226 - MPMX26_00456 0.20 +0.0
489,231 - MPMX26_00456 0.22 -0.3
489,231 - MPMX26_00456 0.22 +0.2
489,241 - MPMX26_00456 0.27 +0.1
489,246 - MPMX26_00456 0.29 +0.4
489,246 - MPMX26_00456 0.29 -0.3
489,246 - MPMX26_00456 0.29 -0.3
489,325 - MPMX26_00456 0.65 +0.2
489,385 - +0.2
489,390 - +1.6
489,390 - -0.3
489,405 - -0.9
489,595 - +0.4
489,600 - -0.2
489,605 - -0.1

Or see this region's nucleotide sequence