Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00413

Experiment: D,L-Lactate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00411 and MPMX26_00412 are separated by 340 nucleotidesMPMX26_00412 and MPMX26_00413 are separated by 105 nucleotidesMPMX26_00413 and MPMX26_00414 are separated by 68 nucleotides MPMX26_00411: MPMX26_00411 - Fumarate hydratase class I, aerobic, at 440,251 to 441,777 _00411 MPMX26_00412: MPMX26_00412 - hypothetical protein, at 442,118 to 442,207 _00412 MPMX26_00413: MPMX26_00413 - Trans-aconitate 2-methyltransferase, at 442,313 to 442,921 _00413 MPMX26_00414: MPMX26_00414 - Phosphate acetyltransferase, at 442,990 to 445,134 _00414 Position (kb) 442 443Strain fitness (log2 ratio) -1 0 1 2 3at 441.486 kb on - strand, within MPMX26_00411at 441.602 kb on - strand, within MPMX26_00411at 441.625 kb on - strandat 442.096 kb on + strandat 442.096 kb on + strandat 442.096 kb on + strandat 442.096 kb on + strandat 442.101 kb on + strandat 442.101 kb on + strandat 442.101 kb on + strandat 442.108 kb on + strandat 442.135 kb on + strand, within MPMX26_00412at 442.166 kb on + strand, within MPMX26_00412at 442.177 kb on + strand, within MPMX26_00412at 442.196 kb on + strand, within MPMX26_00412at 442.196 kb on + strand, within MPMX26_00412at 442.196 kb on + strand, within MPMX26_00412at 442.196 kb on + strand, within MPMX26_00412at 442.201 kb on + strandat 442.201 kb on + strandat 442.201 kb on + strandat 442.201 kb on + strandat 442.208 kb on + strandat 442.374 kb on + strand, within MPMX26_00413at 442.375 kb on + strand, within MPMX26_00413at 442.413 kb on + strand, within MPMX26_00413at 442.465 kb on + strand, within MPMX26_00413at 442.465 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.526 kb on + strand, within MPMX26_00413at 442.544 kb on + strand, within MPMX26_00413at 442.619 kb on + strand, within MPMX26_00413at 442.643 kb on + strand, within MPMX26_00413at 442.727 kb on + strand, within MPMX26_00413at 442.727 kb on + strand, within MPMX26_00413at 442.727 kb on + strand, within MPMX26_00413at 442.745 kb on + strand, within MPMX26_00413at 442.763 kb on + strand, within MPMX26_00413at 442.787 kb on + strand, within MPMX26_00413at 442.787 kb on + strand, within MPMX26_00413at 442.802 kb on + strand, within MPMX26_00413at 442.895 kb on + strandat 442.895 kb on + strandat 443.010 kb on - strandat 443.020 kb on - strandat 443.020 kb on - strandat 443.082 kb on - strandat 443.092 kb on - strandat 443.097 kb on - strandat 443.111 kb on - strandat 443.111 kb on - strandat 443.125 kb on - strandat 443.142 kb on - strandat 443.142 kb on - strandat 443.145 kb on - strandat 443.145 kb on - strandat 443.145 kb on - strandat 443.145 kb on - strandat 443.145 kb on - strandat 443.145 kb on - strandat 443.147 kb on - strandat 443.152 kb on - strandat 443.152 kb on - strandat 443.166 kb on - strandat 443.173 kb on - strandat 443.173 kb on - strandat 443.190 kb on - strandat 443.190 kb on - strandat 443.210 kb on - strand, within MPMX26_00414at 443.212 kb on - strand, within MPMX26_00414at 443.223 kb on - strand, within MPMX26_00414at 443.263 kb on - strand, within MPMX26_00414at 443.263 kb on - strand, within MPMX26_00414at 443.263 kb on - strand, within MPMX26_00414at 443.263 kb on - strand, within MPMX26_00414at 443.263 kb on - strand, within MPMX26_00414at 443.263 kb on - strand, within MPMX26_00414at 443.263 kb on - strand, within MPMX26_00414at 443.263 kb on - strand, within MPMX26_00414at 443.271 kb on - strand, within MPMX26_00414at 443.289 kb on - strand, within MPMX26_00414at 443.289 kb on - strand, within MPMX26_00414at 443.289 kb on - strand, within MPMX26_00414at 443.304 kb on - strand, within MPMX26_00414at 443.364 kb on - strand, within MPMX26_00414at 443.364 kb on - strand, within MPMX26_00414at 443.404 kb on - strand, within MPMX26_00414at 443.533 kb on - strand, within MPMX26_00414at 443.550 kb on - strand, within MPMX26_00414at 443.560 kb on - strand, within MPMX26_00414at 443.560 kb on - strand, within MPMX26_00414at 443.560 kb on - strand, within MPMX26_00414at 443.589 kb on - strand, within MPMX26_00414at 443.590 kb on - strand, within MPMX26_00414at 443.590 kb on - strand, within MPMX26_00414at 443.590 kb on - strand, within MPMX26_00414at 443.590 kb on - strand, within MPMX26_00414at 443.590 kb on - strand, within MPMX26_00414at 443.590 kb on - strand, within MPMX26_00414at 443.590 kb on - strand, within MPMX26_00414at 443.590 kb on - strand, within MPMX26_00414at 443.601 kb on - strand, within MPMX26_00414at 443.626 kb on - strand, within MPMX26_00414at 443.626 kb on - strand, within MPMX26_00414at 443.658 kb on - strand, within MPMX26_00414at 443.668 kb on - strand, within MPMX26_00414at 443.668 kb on - strand, within MPMX26_00414at 443.668 kb on - strand, within MPMX26_00414at 443.701 kb on - strand, within MPMX26_00414at 443.737 kb on - strand, within MPMX26_00414at 443.772 kb on - strand, within MPMX26_00414at 443.833 kb on - strand, within MPMX26_00414at 443.886 kb on - strand, within MPMX26_00414at 443.896 kb on - strand, within MPMX26_00414at 443.896 kb on - strand, within MPMX26_00414at 443.905 kb on - strand, within MPMX26_00414at 443.911 kb on - strand, within MPMX26_00414at 443.911 kb on - strand, within MPMX26_00414

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Per-strain Table

Position Strand Gene LocusTag Fraction D,L-Lactate (C)
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441,486 - MPMX26_00411 0.81 -1.0
441,602 - MPMX26_00411 0.88 +1.4
441,625 - +3.4
442,096 + +0.3
442,096 + +0.6
442,096 + -1.6
442,096 + -0.2
442,101 + -0.4
442,101 + +0.4
442,101 + -0.6
442,108 + -0.1
442,135 + MPMX26_00412 0.19 +0.5
442,166 + MPMX26_00412 0.53 +0.4
442,177 + MPMX26_00412 0.66 +0.5
442,196 + MPMX26_00412 0.87 +0.2
442,196 + MPMX26_00412 0.87 +0.0
442,196 + MPMX26_00412 0.87 -0.0
442,196 + MPMX26_00412 0.87 +0.2
442,201 + -0.5
442,201 + -1.2
442,201 + +0.2
442,201 + -0.3
442,208 + +1.7
442,374 + MPMX26_00413 0.10 +0.7
442,375 + MPMX26_00413 0.10 -0.8
442,413 + MPMX26_00413 0.16 -0.0
442,465 + MPMX26_00413 0.25 -0.4
442,465 + MPMX26_00413 0.25 -0.6
442,526 + MPMX26_00413 0.35 -0.2
442,526 + MPMX26_00413 0.35 -1.3
442,526 + MPMX26_00413 0.35 -0.3
442,526 + MPMX26_00413 0.35 -0.2
442,526 + MPMX26_00413 0.35 +0.3
442,526 + MPMX26_00413 0.35 +0.6
442,526 + MPMX26_00413 0.35 -0.7
442,526 + MPMX26_00413 0.35 -0.3
442,526 + MPMX26_00413 0.35 +0.5
442,526 + MPMX26_00413 0.35 +0.3
442,544 + MPMX26_00413 0.38 +0.4
442,619 + MPMX26_00413 0.50 +0.1
442,643 + MPMX26_00413 0.54 +0.1
442,727 + MPMX26_00413 0.68 +0.4
442,727 + MPMX26_00413 0.68 -0.2
442,727 + MPMX26_00413 0.68 +0.0
442,745 + MPMX26_00413 0.71 -1.0
442,763 + MPMX26_00413 0.74 -0.6
442,787 + MPMX26_00413 0.78 +0.1
442,787 + MPMX26_00413 0.78 -1.1
442,802 + MPMX26_00413 0.80 +0.5
442,895 + +0.1
442,895 + +1.1
443,010 - -0.2
443,020 - +0.6
443,020 - +1.0
443,082 - +0.0
443,092 - -0.3
443,097 - +0.4
443,111 - +0.2
443,111 - -0.5
443,125 - -0.4
443,142 - -0.4
443,142 - +0.1
443,145 - +0.6
443,145 - -0.4
443,145 - +0.4
443,145 - +0.4
443,145 - -0.6
443,145 - -0.2
443,147 - +0.8
443,152 - +0.3
443,152 - +0.4
443,166 - +0.4
443,173 - +0.2
443,173 - -0.1
443,190 - -0.9
443,190 - +0.6
443,210 - MPMX26_00414 0.10 -1.0
443,212 - MPMX26_00414 0.10 +0.1
443,223 - MPMX26_00414 0.11 -0.1
443,263 - MPMX26_00414 0.13 +0.4
443,263 - MPMX26_00414 0.13 -0.4
443,263 - MPMX26_00414 0.13 +0.1
443,263 - MPMX26_00414 0.13 +0.6
443,263 - MPMX26_00414 0.13 +0.3
443,263 - MPMX26_00414 0.13 +0.7
443,263 - MPMX26_00414 0.13 -0.1
443,263 - MPMX26_00414 0.13 +0.7
443,271 - MPMX26_00414 0.13 -0.3
443,289 - MPMX26_00414 0.14 +0.5
443,289 - MPMX26_00414 0.14 +0.2
443,289 - MPMX26_00414 0.14 +0.2
443,304 - MPMX26_00414 0.15 +0.9
443,364 - MPMX26_00414 0.17 +0.4
443,364 - MPMX26_00414 0.17 +1.1
443,404 - MPMX26_00414 0.19 -0.9
443,533 - MPMX26_00414 0.25 +0.5
443,550 - MPMX26_00414 0.26 -1.2
443,560 - MPMX26_00414 0.27 +0.1
443,560 - MPMX26_00414 0.27 -0.5
443,560 - MPMX26_00414 0.27 -0.9
443,589 - MPMX26_00414 0.28 -0.7
443,590 - MPMX26_00414 0.28 -1.2
443,590 - MPMX26_00414 0.28 +0.4
443,590 - MPMX26_00414 0.28 -0.3
443,590 - MPMX26_00414 0.28 -0.1
443,590 - MPMX26_00414 0.28 +0.1
443,590 - MPMX26_00414 0.28 +0.1
443,590 - MPMX26_00414 0.28 +0.8
443,590 - MPMX26_00414 0.28 +0.3
443,601 - MPMX26_00414 0.28 +0.0
443,626 - MPMX26_00414 0.30 -0.1
443,626 - MPMX26_00414 0.30 -1.3
443,658 - MPMX26_00414 0.31 +0.2
443,668 - MPMX26_00414 0.32 +0.5
443,668 - MPMX26_00414 0.32 +0.0
443,668 - MPMX26_00414 0.32 -0.3
443,701 - MPMX26_00414 0.33 -1.3
443,737 - MPMX26_00414 0.35 -0.1
443,772 - MPMX26_00414 0.36 -0.0
443,833 - MPMX26_00414 0.39 -0.7
443,886 - MPMX26_00414 0.42 +0.3
443,896 - MPMX26_00414 0.42 +0.4
443,896 - MPMX26_00414 0.42 +1.5
443,905 - MPMX26_00414 0.43 -0.4
443,911 - MPMX26_00414 0.43 -0.2
443,911 - MPMX26_00414 0.43 +0.2

Or see this region's nucleotide sequence