Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5309

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,317,461	-				-0.2
2,317,502	-				+0.4
2,317,782	+		GFF5308	0.23	-0.6
2,317,783	-		GFF5308	0.24	-0.1
2,318,051	+		GFF5309	0.18	-0.3
2,318,153	+		GFF5309	0.37	+1.9
2,318,154	-		GFF5309	0.38	+0.4
2,318,560	+				-0.2
2,318,561	-				+0.4
2,318,561	-				+0.0
2,318,561	-				+0.4
2,318,624	-		GFF5310	0.11	-0.1
2,318,669	-		GFF5310	0.14	+0.1
2,318,833	-		GFF5310	0.25	-0.1
2,318,893	+		GFF5310	0.30	+0.4
2,318,962	-		GFF5310	0.34	+0.3