Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5002

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,017,135	-		GFF5001	0.18	+0.5
2,017,306	-		GFF5001	0.37	-0.5
2,017,542	+		GFF5001	0.62	-0.1
2,017,693	-		GFF5001	0.78	-0.6
2,017,693	-		GFF5001	0.78	+0.3
2,017,858	-				-0.1
2,017,858	-				+0.7
2,017,890	+				+0.9
2,017,891	-				+0.2
2,017,993	-		GFF5002	0.18	-0.0
2,018,630	+		GFF5003	0.42	-0.3
2,018,726	+		GFF5003	0.61	+0.1
2,018,896	+				+0.1
2,018,897	+				+0.3
2,018,897	+				-0.4
2,018,928	-				-1.1
2,019,012	-				+0.2
2,019,113	+		GFF5004	0.17	+0.2
2,019,114	-		GFF5004	0.17	+0.3
2,019,114	-		GFF5004	0.17	+0.3
2,019,191	+		GFF5004	0.24	-0.9
2,019,211	+		GFF5004	0.26	-0.0
2,019,297	+		GFF5004	0.34	+0.2
2,019,329	+		GFF5004	0.37	-0.2
2,019,330	-		GFF5004	0.38	-0.7
2,019,330	-		GFF5004	0.38	+0.1