Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4992

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
2,008,309	+		GFF4991	0.19	-0.7
2,008,309	+		GFF4991	0.19	+0.2
2,008,310	-		GFF4991	0.19	-0.1
2,008,310	-		GFF4991	0.19	+0.8
2,008,324	+		GFF4991	0.20	-0.0
2,008,516	+		GFF4991	0.37	-1.8
2,008,516	+		GFF4991	0.37	+0.4
2,008,516	+		GFF4991	0.37	+0.3
2,008,517	-		GFF4991	0.37	+0.4
2,008,528	+		GFF4991	0.38	-0.3
2,008,529	-		GFF4991	0.38	+0.2
2,008,529	-		GFF4991	0.38	+1.4
2,008,529	-		GFF4991	0.38	-0.2
2,008,540	+		GFF4991	0.39	+0.2
2,009,002	+		GFF4991	0.80	+0.5
2,009,026	+		GFF4991	0.82	+1.8
2,009,026	+		GFF4991	0.82	+0.9
2,009,027	-		GFF4991	0.82	-0.3
2,009,027	-		GFF4991	0.82	-0.3
2,009,048	-		GFF4991	0.84	+0.0
2,009,065	+		GFF4991	0.85	-0.5
2,009,066	-		GFF4991	0.85	+1.2
2,009,155	+				-0.2
2,009,155	+				-0.6
2,009,155	+				+0.4
2,009,155	+				+0.4
2,009,155	+				+0.2
2,009,156	-				+1.1
2,009,589	-		GFF4992	0.32	-0.3
2,009,745	+		GFF4992	0.45	-0.9
2,009,745	+		GFF4992	0.45	-1.8
2,010,123	+		GFF4992	0.78	-0.0
2,010,198	+		GFF4992	0.85	-0.3
2,010,437	+				+0.1
2,010,438	-				-0.4
2,011,031	+		GFF4993	0.76	-1.1