Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF485

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
149,795	-		GFF484	0.39	+0.4
150,498	-				-0.5
150,685	-		GFF485	0.38	+0.4
150,871	-		GFF485	0.75	+0.3
150,978	+				+0.2
150,979	-				-0.5
150,979	-				-0.2
150,979	-				+0.1
150,980	+				+1.0
151,143	+				+0.8
151,172	+				-0.5
151,172	+				+0.1
151,172	+				-0.1
151,172	+				+0.4
151,240	+				-0.1
151,303	+				+0.5
151,304	-				+0.4
151,359	+				-0.4
151,414	+				-0.2
151,414	+				+0.7
151,415	-				-0.2
151,415	-				-0.7
151,465	-				-0.1
151,516	+				-0.5
151,517	-				-0.4
151,594	-				+0.0
151,594	-				-0.1
151,947	+		GFF486	0.12	+0.1
151,947	+		GFF486	0.12	-2.4
151,979	+		GFF486	0.15	+0.5