Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF476

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
138,593	+		GFF475	0.12	+0.1
138,593	+		GFF475	0.12	+0.0
138,594	-		GFF475	0.12	-0.5
138,686	+		GFF475	0.21	+0.1
138,687	-		GFF475	0.21	+0.5
138,704	+		GFF475	0.23	+0.1
138,809	+		GFF475	0.33	+0.2
138,809	+		GFF475	0.33	+1.6
138,809	+		GFF475	0.33	-0.5
139,910	-		GFF476	0.31	+1.1
140,485	+		GFF476	0.73	-0.5
140,485	+		GFF476	0.73	+0.8
140,486	-		GFF476	0.73	+0.2
140,486	-		GFF476	0.73	+0.5
140,486	-		GFF476	0.73	-0.2
140,663	+		GFF476	0.86	+0.2
140,986	+				+0.0
140,986	+				-0.9
141,148	+		GFF477	0.16	-2.4