Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4431

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
1,360,657	+				-0.2
1,361,061	+				-0.1
1,361,180	+				+0.4
1,361,181	-				+1.5
1,361,181	-				+0.2
1,361,255	+				+0.2
1,361,450	+				+0.6
1,361,451	-				+0.0
1,361,489	+				-0.1
1,361,490	-				-0.2
1,361,563	+				-0.6
1,361,563	+				-0.1
1,361,910	+		GFF4431	0.46	+0.1
1,361,911	-		GFF4431	0.46	-0.2
1,362,297	+		GFF4431	0.88	-0.4
1,362,402	+				+0.4
1,362,657	-				-1.7
1,363,286	-		GFF4433	0.20	+0.4