Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF433

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
102,232	-				+0.5
102,232	-				-0.0
102,415	-		GFF432	0.27	-1.4
102,465	+		GFF432	0.32	+0.5
102,466	-		GFF432	0.33	+0.2
102,466	-		GFF432	0.33	-1.7
102,705	+		GFF432	0.57	+0.5
102,706	-		GFF432	0.57	+0.1
102,971	-		GFF432	0.84	+0.7
102,971	-		GFF432	0.84	+1.2
103,125	+				+0.6
103,453	-		GFF433	0.33	-0.5
103,588	-		GFF433	0.47	+0.1
103,674	+		GFF433	0.56	+0.2
103,675	-		GFF433	0.56	-2.1
103,861	-		GFF433	0.75	-2.1
104,141	-				+0.1
104,389	+		GFF434	0.64	-1.1
104,390	-		GFF434	0.64	-0.4