Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4175

Experiment: Ying_all64 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 2
1,091,526	+		GFF4174	0.54	+0.4
1,091,527	-		GFF4174	0.54	+1.0
1,091,527	-		GFF4174	0.54	+0.1
1,091,527	-		GFF4174	0.54	-0.3
1,091,527	-		GFF4174	0.54	-0.2
1,091,784	+		GFF4174	0.67	-0.6
1,091,784	+		GFF4174	0.67	-0.6
1,091,785	-		GFF4174	0.67	-0.2
1,091,913	+		GFF4174	0.73	-0.4
1,091,914	-		GFF4174	0.74	+0.7
1,091,914	-		GFF4174	0.74	-1.1
1,091,914	-		GFF4174	0.74	+0.3
1,091,942	-		GFF4174	0.75	+0.1
1,092,076	-		GFF4174	0.82	+0.1
1,092,439	+				-0.1
1,092,439	+				+0.5
1,092,439	+				-0.2
1,092,449	+				+0.3
1,092,637	+		GFF4175	0.42	+0.0
1,092,638	-		GFF4175	0.43	-0.4
1,092,689	+		GFF4175	0.54	-0.2
1,092,689	+		GFF4175	0.54	-0.2
1,092,692	+		GFF4175	0.54	+0.2
1,092,692	+		GFF4175	0.54	-0.1
1,092,692	+		GFF4175	0.54	+0.2
1,092,692	+		GFF4175	0.54	-0.7
1,092,692	+		GFF4175	0.54	-0.0
1,092,693	-		GFF4175	0.54	-0.4
1,092,693	-		GFF4175	0.54	-0.9
1,093,289	-		GFF4176	0.37	+0.5
1,093,760	+		GFF4176	0.82	+0.7
1,093,761	-		GFF4176	0.82	+0.1
1,093,761	-		GFF4176	0.82	-0.2